RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 ICOSQ9Y6W8 199 aa4.34□□□□□ -1.71
UCA1-202ENST00000589333 PLECQ15149 4684 aaKnown RBP4.34□□□□□ -1.72
UCA1-202ENST00000589333 IGLV2-18A0A075B6J9 118 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 PRSS47A8MTI9 375 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 IGLL5B9A064 214 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 TNFRSF6BO95407 300 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 TRGC2P03986 189 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 SRIP30626 198 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 CKS2P33552 79 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 POLR2KP53803 58 aaKnown RBP4.33□□□□□ -1.72
UCA1-202ENST00000589333 SUMO2P61956 95 aaKnown RBP4.33□□□□□ -1.72
UCA1-202ENST00000589333 RPL32P62910 135 aaKnown RBP4.33□□□□□ -1.72
UCA1-202ENST00000589333 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
UCA1-202ENST00000589333 GAGE1Q13065 139 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 GAGE4Q13068 117 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 GAGE5Q13069 117 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 GAGE13Q4V321 117 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
UCA1-202ENST00000589333 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 ZFAND6Q6FIF0 208 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
UCA1-202ENST00000589333 PRELID3AQ96N28 172 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 LYSTQ99698 3801 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 TMEM70Q9BUB7 260 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 TRAPPC1Q9Y5R8 145 aa4.33□□□□□ -1.72
UCA1-202ENST00000589333 ALMS1Q8TCU4 4167 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 TCTAP57738 103 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 TIRAPP58753 221 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 MRPL23Q16540 153 aaKnown RBP4.32□□□□□ -1.72
UCA1-202ENST00000589333 NTM-AS1Q6ZSK4 140 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 NEGR1Q7Z3B1 354 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 ZNRF2Q8NHG8 242 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 C18orf32Q8TCD1 76 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 C20orf78Q9BR46 151 aa4.32□□□□□ -1.72
UCA1-202ENST00000589333 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 IGHV3-38A0A0C4DH36 116 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 LINC01546A6NGU7 62 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 C3orf84H3BNL1 204 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 NUDT3O95989 172 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 PPP1R17O96001 155 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 TSHBP01222 138 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 S100A2P29034 98 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 IQCJQ1A5X6 159 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 DAZ4Q86SG3 579 aaKnown RBP4.31□□□□□ -1.72
UCA1-202ENST00000589333 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 ST20Q9HBF5 79 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 DAZ3Q9NR90 486 aaKnown RBP4.31□□□□□ -1.72
UCA1-202ENST00000589333 KLK5Q9Y337 293 aaPredicted RBP4.31□□□□□ -1.72
UCA1-202ENST00000589333 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
UCA1-202ENST00000589333 A0A096LNJ9 63 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BKO60814 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BJP06899 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BOP23527 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BBP33778 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BDP58876 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BCP62807 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST2H2BEQ16778 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 ESRGQ1W209 222 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.3□□□□□ -1.72
UCA1-202ENST00000589333 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 SH2D6Q7Z4S9 175 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BHQ93079 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BNQ99877 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 HIST1H2BMQ99879 126 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 UPK3BQ9BT76 320 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 GTSF1LQ9H1H1 148 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 MAP1LC3AQ9H492 121 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 MRPS16Q9Y3D3 137 aaKnown RBP4.3□□□□□ -1.72
UCA1-202ENST00000589333 LINC00588Q9Y4M8 146 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 TNFRSF18Q9Y5U5 241 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
UCA1-202ENST00000589333 TSTD3H0UI37 97 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 I3L3M4 83 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 ESDP10768 282 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 PMCHP20382 165 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 IFI27P40305 119 aaPredicted RBP4.29□□□□□ -1.72
UCA1-202ENST00000589333 PKIAP61925 76 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 LELP1Q5T871 98 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 WFDC10BQ8IUB3 73 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 Q8N8P6 123 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 DEFB104AQ8WTQ1 72 aa4.29□□□□□ -1.72
UCA1-202ENST00000589333 NXT2Q9NPJ8 142 aaKnown RBP4.29□□□□□ -1.72
UCA1-202ENST00000589333 VPS13DQ5THJ4 4388 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 K7EMI3 77 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 VCYO14598 125 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 TCAPO15273 167 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 AMTP48728 403 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 Q0VG73 95 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 COTL1Q14019 142 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 TMEM97Q5BJF2 176 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 PYY3Q5JQD4 70 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms