RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 LAGE3Q14657 143 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 PACRGQ96M98 296 aaPredicted RBP10.38□□□□□ -0.75
NFIX-208ENST00000587260 TSHBP01222 138 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 STARD9Q9P2P6 4700 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 MRPL23Q16540 153 aaKnown RBP10.37□□□□□ -0.75
NFIX-208ENST00000587260 GTSF1LQ9H1H1 148 aa10.37□□□□□ -0.75
NFIX-208ENST00000587260 ICOSQ9Y6W8 199 aa10.37□□□□□ -0.75
NFIX-208ENST00000587260 A0A096LNJ9 63 aa10.36□□□□□ -0.75
NFIX-208ENST00000587260 FCER1GP30273 86 aa10.36□□□□□ -0.75
NFIX-208ENST00000587260 COTL1Q14019 142 aa10.36□□□□□ -0.75
NFIX-208ENST00000587260 SH2D6Q7Z4S9 175 aa10.36□□□□□ -0.75
NFIX-208ENST00000587260 KLK5Q9Y337 293 aaPredicted RBP10.36□□□□□ -0.75
NFIX-208ENST00000587260 IGHV1-24A0A0C4DH33 117 aa10.35□□□□□ -0.75
NFIX-208ENST00000587260 IGHV3-38A0A0C4DH36 116 aa10.35□□□□□ -0.75
NFIX-208ENST00000587260 G0S2P27469 103 aa10.35□□□□□ -0.75
NFIX-208ENST00000587260 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
NFIX-208ENST00000587260 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
NFIX-208ENST00000587260 IFITM10A6NMD0 228 aa10.34□□□□□ -0.75
NFIX-208ENST00000587260 AMTP48728 403 aa10.34□□□□□ -0.75
NFIX-208ENST00000587260 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
NFIX-208ENST00000587260 DEFB104AQ8WTQ1 72 aa10.34□□□□□ -0.75
NFIX-208ENST00000587260 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
NFIX-208ENST00000587260 LINC01549A6NIU2 74 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 HBDP02042 147 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 S100A2P29034 98 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 PDZD11Q5EBL8 140 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 NTM-AS1Q6ZSK4 140 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 C15orf53Q8NAA6 179 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 HIST1H2BLQ99880 126 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
NFIX-208ENST00000587260 C20orf203Q8NBC4 194 aa10.32□□□□□ -0.76
NFIX-208ENST00000587260 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
NFIX-208ENST00000587260 APLNQ9ULZ1 77 aa10.32□□□□□ -0.76
NFIX-208ENST00000587260 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
NFIX-208ENST00000587260 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
NFIX-208ENST00000587260 TIRAPP58753 221 aa10.31□□□□□ -0.76
NFIX-208ENST00000587260 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
NFIX-208ENST00000587260 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
NFIX-208ENST00000587260 BTF3P20290 206 aaKnown RBP10.3□□□□□ -0.76
NFIX-208ENST00000587260 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
NFIX-208ENST00000587260 C3orf84H3BNL1 204 aa10.29□□□□□ -0.76
NFIX-208ENST00000587260 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
NFIX-208ENST00000587260 FABP4P15090 132 aa10.29□□□□□ -0.76
NFIX-208ENST00000587260 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 H7C423 109 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 LOC105371267A0A1B0GV96 52 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 LYPD5Q6UWN5 251 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 TMEM243Q9BU79 118 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 PYGO1Q9Y3Y4 419 aa10.28□□□□□ -0.76
NFIX-208ENST00000587260 PLECQ15149 4684 aaKnown RBP10.27□□□□□ -0.76
NFIX-208ENST00000587260 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
NFIX-208ENST00000587260 RPL39P62891 51 aaKnown RBP10.27□□□□□ -0.77
NFIX-208ENST00000587260 ESRGQ1W209 222 aa10.27□□□□□ -0.77
NFIX-208ENST00000587260 ERASQ7Z444 233 aa10.27□□□□□ -0.77
NFIX-208ENST00000587260 TIMM17AQ99595 171 aa10.27□□□□□ -0.77
NFIX-208ENST00000587260 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
NFIX-208ENST00000587260 ATP5LO75964 103 aa10.26□□□□□ -0.77
NFIX-208ENST00000587260 NPSP0C0P6 89 aa10.26□□□□□ -0.77
NFIX-208ENST00000587260 TCTAP57738 103 aa10.26□□□□□ -0.77
NFIX-208ENST00000587260 LELP1Q5T871 98 aa10.26□□□□□ -0.77
NFIX-208ENST00000587260 MRPL52Q86TS9 123 aaKnown RBP10.26□□□□□ -0.77
NFIX-208ENST00000587260 SCGB3A1Q96QR1 104 aa10.26□□□□□ -0.77
NFIX-208ENST00000587260 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
NFIX-208ENST00000587260 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
NFIX-208ENST00000587260 LYSTQ99698 3801 aa10.25□□□□□ -0.77
NFIX-208ENST00000587260 SPANXA1Q9NS26 97 aa10.25□□□□□ -0.77
NFIX-208ENST00000587260 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
NFIX-208ENST00000587260 CSDC2Q9Y534 153 aaKnown RBP10.25□□□□□ -0.77
NFIX-208ENST00000587260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
NFIX-208ENST00000587260 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
NFIX-208ENST00000587260 CCL18P55774 89 aa10.24□□□□□ -0.77
NFIX-208ENST00000587260 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
NFIX-208ENST00000587260 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
NFIX-208ENST00000587260 OR10D4PQ8NGN7 298 aa10.24□□□□□ -0.77
NFIX-208ENST00000587260 IFI27L1Q96BM0 104 aa10.24□□□□□ -0.77
NFIX-208ENST00000587260 LINC00588Q9Y4M8 146 aa10.24□□□□□ -0.77
NFIX-208ENST00000587260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
NFIX-208ENST00000587260 UBE2L6O14933 153 aa10.23□□□□□ -0.77
NFIX-208ENST00000587260 C3orf79P0CE67 100 aa10.23□□□□□ -0.77
NFIX-208ENST00000587260 FGF6P10767 208 aa10.23□□□□□ -0.77
NFIX-208ENST00000587260 SPATA12Q7Z6I5 190 aa10.23□□□□□ -0.77
NFIX-208ENST00000587260 CHCHD5Q9BSY4 110 aa10.23□□□□□ -0.77
NFIX-208ENST00000587260 MAP1LC3CQ9BXW4 147 aa10.23□□□□□ -0.77
NFIX-208ENST00000587260 ZNF25P17030 456 aaPredicted RBP10.22□□□□□ -0.77
NFIX-208ENST00000587260 MRPS36P82909 103 aaKnown RBP10.22□□□□□ -0.77
NFIX-208ENST00000587260 WFDC10BQ8IUB3 73 aa10.22□□□□□ -0.77
NFIX-208ENST00000587260 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
NFIX-208ENST00000587260 A0A1B0GUV1 79 aa10.21□□□□□ -0.78
NFIX-208ENST00000587260 PKIAP61925 76 aa10.21□□□□□ -0.78
NFIX-208ENST00000587260 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.78
NFIX-208ENST00000587260 MRPS16Q9Y3D3 137 aaKnown RBP10.21□□□□□ -0.78
NFIX-208ENST00000587260 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
NFIX-208ENST00000587260 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
NFIX-208ENST00000587260 SYS1-DBNDD2H3BUS1 97 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms