RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 PRSS47A8MTI9 375 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 HBDP02042 147 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 BTF3P20290 206 aaKnown RBP7.29□□□□□ -1.24
SS18-221ENST00000582448 SUMO2P61956 95 aaKnown RBP7.29□□□□□ -1.24
SS18-221ENST00000582448 LGALS9CQ6DKI2 356 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 Q6ZWC4 215 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 NRACQ8N912 160 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 KIR2DL5BQ8NHK3 375 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 MAP1LC3CQ9BXW4 147 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
SS18-221ENST00000582448 TCAPO15273 167 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 AZU1P20160 251 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 LAGE3Q14657 143 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 PMCHL1Q16048 86 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 LGALS9BQ3B8N2 356 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 RASL10AQ92737 203 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 JPT2Q9H910 190 aa7.28□□□□□ -1.24
SS18-221ENST00000582448 HECTD4Q9Y4D8 3996 aa7.27□□□□□ -1.24
SS18-221ENST00000582448 TRGV1A0A0A0MS02 117 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 LINC01549A6NIU2 74 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 VCYO14598 125 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 CIDEAO60543 219 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 CRYGDP07320 174 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 GATA1P15976 413 aaPredicted RBP7.27□□□□□ -1.25
SS18-221ENST00000582448 FCER1GP30273 86 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
SS18-221ENST00000582448 ZFP2Q6ZN57 461 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 ZNF705AQ6ZN79 300 aaPredicted RBP7.27□□□□□ -1.25
SS18-221ENST00000582448 OR4C5Q8NGB2 326 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 RNASE8Q8TDE3 154 aaKnown RBP7.27□□□□□ -1.25
SS18-221ENST00000582448 KIR2DL4Q99706 377 aa7.27□□□□□ -1.25
SS18-221ENST00000582448 MRPL16Q9NX20 251 aaKnown RBP7.27□□□□□ -1.25
SS18-221ENST00000582448 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 GIG44P09565 113 aaPredicted RBP7.26□□□□□ -1.25
SS18-221ENST00000582448 NPSP0C0P6 89 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 LINC00315P59091 139 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 NANOS2P60321 138 aaKnown RBP7.26□□□□□ -1.25
SS18-221ENST00000582448 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
SS18-221ENST00000582448 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 CSNK1G2-AS1Q8NCQ2 148 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
SS18-221ENST00000582448 TP53TG1Q9Y2A0 90 aa7.26□□□□□ -1.25
SS18-221ENST00000582448 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 TRBV6-5A0A0K0K1A5 114 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 M0QY20 66 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 RS1O15537 224 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 RNF183Q96D59 192 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 NOP10Q9NPE3 64 aaKnown RBP7.25□□□□□ -1.25
SS18-221ENST00000582448 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
SS18-221ENST00000582448 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 ATP5LO75964 103 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 PRM2P04554 102 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 DNAJC30Q96LL9 226 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
SS18-221ENST00000582448 IGLV2-18A0A075B6J9 118 aa7.23□□□□□ -1.25
SS18-221ENST00000582448 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
SS18-221ENST00000582448 H0Y8G0 127 aa7.23□□□□□ -1.25
SS18-221ENST00000582448 C11orf45Q8TAV5 145 aa7.23□□□□□ -1.25
SS18-221ENST00000582448 VAMP8Q9BV40 100 aa7.23□□□□□ -1.25
SS18-221ENST00000582448 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 PCP4L1A6NKN8 68 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 IGLL5B9A064 214 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 HSBP1L1C9JCN9 74 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 I3L3M4 83 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 DEFB4AO15263 64 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 GAGE7O76087 117 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 GAGE12FP0CL80 117 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 GAGE12GP0CL81 117 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 GAGE12IP0CL82 117 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 EMP1P54849 157 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 Q6ZTI0 123 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 IFI27L1Q96BM0 104 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 CYSLTR1Q9Y271 337 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 AGRNO00468 2067 aa7.22□□□□□ -1.25
SS18-221ENST00000582448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
SS18-221ENST00000582448 PRSS1P07477 247 aa7.21□□□□□ -1.26
SS18-221ENST00000582448 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.26
SS18-221ENST00000582448 PKIAP61925 76 aa7.21□□□□□ -1.26
SS18-221ENST00000582448 RHOHQ15669 191 aa7.21□□□□□ -1.26
SS18-221ENST00000582448 UFSP1Q6NVU6 142 aa7.21□□□□□ -1.26
SS18-221ENST00000582448 Q6ZN92 141 aa7.21□□□□□ -1.26
SS18-221ENST00000582448 SPATA12Q7Z6I5 190 aa7.21□□□□□ -1.26
SS18-221ENST00000582448 A0A096LNJ9 63 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 TRGV4A0A0C4DH28 118 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 TRBV10-1A0A0K0K1A3 114 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms