RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-209	ENST00000580904	RAB5A	P20339	215 aa		5	□□□□□ -1.61
PSMD11-209	ENST00000580904	CKS2	P33552	79 aa		5	□□□□□ -1.61
PSMD11-209	ENST00000580904	CEMP1	Q6PRD7	247 aa	Predicted RBP	5	□□□□□ -1.61
PSMD11-209	ENST00000580904	MUC7	Q8TAX7	377 aa		5	□□□□□ -1.61
PSMD11-209	ENST00000580904	URB1-AS1	Q96HZ7	61 aa		5	□□□□□ -1.61
PSMD11-209	ENST00000580904	PRADC1	Q9BSG0	188 aa		5	□□□□□ -1.61
PSMD11-209	ENST00000580904	NUPR2	A6NF83	97 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904		D6R8Y8	96 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	PPBP	P02775	128 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	RPS10	P46783	165 aa	Known RBP	4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	FABP9	Q0Z7S8	132 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	ORMDL3	Q8N138	153 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	RPL39L	Q96EH5	51 aa	Known RBP	4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	NIT2	Q9NQR4	276 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	TRAPPC1	Q9Y5R8	145 aa		4.99	□□□□□ -1.61
PSMD11-209	ENST00000580904	STARD9	Q9P2P6	4700 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	TRBV7-3	A0A075B6L6	115 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904		A0A096LPF7	62 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	TRBV6-5	A0A0K0K1A5	114 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	IGLL5	B9A064	214 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	NPY	P01303	97 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	LINC00694	P0DN24	101 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	RPL36A	P83881	106 aa	Known RBP	4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	GAGE1	Q13065	139 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	GAGE4	Q13068	117 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	GAGE5	Q13069	117 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	KIAA1644	Q3SXP7	199 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	OR10J3	Q5JRS4	329 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	SERTAD4-AS1	Q5TG53	156 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	ZFAND6	Q6FIF0	208 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	PRR26	Q8N8Z3	221 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	C15orf53	Q8NAA6	179 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	NEXN-AS1	Q8NBZ9	246 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	ZNRF2	Q8NHG8	242 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	DNAJC30	Q96LL9	226 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	PRELID3A	Q96N28	172 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	KLK5	Q9Y337	293 aa	Predicted RBP	4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	ICOS	Q9Y6W8	199 aa		4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	PLEC	Q15149	4684 aa	Known RBP	4.98	□□□□□ -1.61
PSMD11-209	ENST00000580904	IGKV2D-30	A0A075B6S6	120 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	PHOX2A	O14813	284 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	PPP1R17	O96001	155 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	TRGC2	P03986	189 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	SRI	P30626	198 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	UBE2D3	P61077	147 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	UBE2D2	P62837	147 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	MRPL23	Q16540	153 aa	Known RBP	4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	ST20	Q9HBF5	79 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	LAMTOR2	Q9Y2Q5	125 aa		4.97	□□□□□ -1.61
PSMD11-209	ENST00000580904	SDHAF1	A6NFY7	115 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	AMT	P48728	403 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	SH2D6	Q7Z4S9	175 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	ATP6V0E2	Q8NHE4	81 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	C20orf78	Q9BR46	151 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	TMEM70	Q9BUB7	260 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	APLN	Q9ULZ1	77 aa		4.96	□□□□□ -1.62
PSMD11-209	ENST00000580904	IGHV3-38	A0A0C4DH36	116 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	TRBV27	A0A0K0K1C4	114 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	PRSS47	A8MTI9	375 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	C3orf84	H3BNL1	204 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	POLR2K	P53803	58 aa	Known RBP	4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	TCTA	P57738	103 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	RPL32	P62910	135 aa	Known RBP	4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	NEGR1	Q7Z3B1	354 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	DAZ4	Q86SG3	579 aa	Known RBP	4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	SMIM2	Q9BVW6	85 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	MAP1LC3A	Q9H492	121 aa		4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	DAZ3	Q9NR90	486 aa	Known RBP	4.95	□□□□□ -1.62
PSMD11-209	ENST00000580904	IGLV2-18	A0A075B6J9	118 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	LOC389332	A0A1B0GUA5	103 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904		I3L3M4	83 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	VCY	O14598	125 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	PMCH	P20382	165 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	CASC10	Q5T4H9	136 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	LYPD5	Q6UWN5	251 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	C18orf32	Q8TCD1	76 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	DEFB104A	Q8WTQ1	72 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	GTSF1L	Q9H1H1	148 aa		4.94	□□□□□ -1.62
PSMD11-209	ENST00000580904	VPS13D	Q5THJ4	4388 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	TRBV6-8	A0A0A6YYG3	113 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	TSHB	P01222	138 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	IFI27	P40305	119 aa	Predicted RBP	4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	COTL1	Q14019	142 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	IQCJ	Q1A5X6	159 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	ESRG	Q1W209	222 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	TMEM97	Q5BJF2	176 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	NTM-AS1	Q6ZSK4	140 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904		Q8N8P6	123 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	KIR2DL4	Q99706	377 aa		4.93	□□□□□ -1.62
PSMD11-209	ENST00000580904	DNAH1	Q9P2D7	4330 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	TCAP	O15273	167 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BK	O60814	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BJ	P06899	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BO	P23527	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	FCER1G	P30273	86 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BB	P33778	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BD	P58876	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BC	P62807	126 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms