RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 MAPKAPK5-AS1Q8N8E1 139 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 ZMAT4Q9H898 229 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 A0A087WX48 190 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 INAFM1C9JVW0 142 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 OTOGQ6ZRI0 2925 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 IGHV3OR16-12A0A075B7B8 117 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 A6NJY4 79 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
USP43-205ENST00000574408 MORN3Q6PF18 240 aaPredicted RBP7.64□□□□□ -1.19
USP43-205ENST00000574408 NIPBLQ6KC79 2804 aaeCLIP7.63□□□□□ -1.19
USP43-205ENST00000574408 TRBV6-5A0A0K0K1A5 114 aa7.63□□□□□ -1.19
USP43-205ENST00000574408 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
USP43-205ENST00000574408 M0R2P5 195 aa7.63□□□□□ -1.19
USP43-205ENST00000574408 ZFP2Q6ZN57 461 aa7.63□□□□□ -1.19
USP43-205ENST00000574408 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
USP43-205ENST00000574408 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
USP43-205ENST00000574408 NSD1Q96L73 2696 aaPredicted RBP7.63□□□□□ -1.19
USP43-205ENST00000574408 C3orf56Q8N813 242 aa7.63□□□□□ -1.19
USP43-205ENST00000574408 TP53TG1Q9Y2A0 90 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 TRBV27A0A0K0K1C4 114 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 C12orf74Q32Q52 190 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 GEMIN7Q9H840 131 aaKnown RBP7.62□□□□□ -1.19
USP43-205ENST00000574408 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
USP43-205ENST00000574408 BAALCQ8WXS3 180 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 WFDC10AQ9H1F0 79 aa7.62□□□□□ -1.19
USP43-205ENST00000574408 TRAV12-1A0A0B4J245 112 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 A8MWV9 139 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 F8VRH5 84 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 H7C1H1 209 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 C11orf72Q8NBR9 251 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 IGLL5B9A064 214 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 C1orf158Q8N1D5 194 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 NEXN-AS1Q8NBZ9 246 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 TRBV20-1A0A075B6N2 111 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 P0DMU3 169 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 FAM231AP0DMU4 169 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 FAM231CP0DMU5 169 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 CEND1Q8N111 149 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 LINC00467Q9BRT7 94 aa7.61□□□□□ -1.19
USP43-205ENST00000574408 PF4P02776 101 aa7.6□□□□□ -1.19
USP43-205ENST00000574408 PLNP26678 52 aa7.6□□□□□ -1.19
USP43-205ENST00000574408 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
USP43-205ENST00000574408 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
USP43-205ENST00000574408 PRSS29PA6NIE9 313 aa7.59□□□□□ -1.19
USP43-205ENST00000574408 NDUFA11Q86Y39 141 aa7.59□□□□□ -1.19
USP43-205ENST00000574408 SPXQ9BT56 116 aa7.59□□□□□ -1.19
USP43-205ENST00000574408 RPL35AP18077 110 aaKnown RBP7.59□□□□□ -1.19
USP43-205ENST00000574408 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
USP43-205ENST00000574408 CFAP126Q5VTH2 177 aa7.59□□□□□ -1.19
USP43-205ENST00000574408 TSHBP01222 138 aa7.59□□□□□ -1.19
USP43-205ENST00000574408 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 I3L3M4 83 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 CRYBA4P53673 196 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 PIK3CD-AS1Q5SR53 167 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 UFSP1Q6NVU6 142 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 Q6ZSN1 163 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 RHOHQ15669 191 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 FLNBO75369 2602 aaKnown RBP7.58□□□□□ -1.2
USP43-205ENST00000574408 BEAN1Q3B7T3 259 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 Q9UF83 564 aa7.58□□□□□ -1.2
USP43-205ENST00000574408 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 TRGV1A0A0A0MS02 117 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 RHODO00212 210 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 MT-ATP8P03928 68 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 TMEM141Q96I45 108 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 TIMM17AQ99595 171 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 PRADC1Q9BSG0 188 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 EDA2RQ9HAV5 297 aa7.57□□□□□ -1.2
USP43-205ENST00000574408 B5MCH6 92 aa7.56□□□□□ -1.2
USP43-205ENST00000574408 SIVA1O15304 175 aa7.56□□□□□ -1.2
USP43-205ENST00000574408 GIG44P09565 113 aaPredicted RBP7.56□□□□□ -1.2
USP43-205ENST00000574408 PMVKQ15126 192 aa7.56□□□□□ -1.2
USP43-205ENST00000574408 LINC00482Q8N8I6 264 aa7.56□□□□□ -1.2
USP43-205ENST00000574408 C20orf203Q8NBC4 194 aa7.56□□□□□ -1.2
USP43-205ENST00000574408 FAM110AQ9BQ89 295 aa7.56□□□□□ -1.2
USP43-205ENST00000574408 OPRPNQ99935 248 aaPredicted RBP7.56□□□□□ -1.2
USP43-205ENST00000574408 C9JAW5 83 aa7.55□□□□□ -1.2
USP43-205ENST00000574408 RS1O15537 224 aa7.55□□□□□ -1.2
USP43-205ENST00000574408 RNASE13Q5GAN3 156 aaKnown RBP7.55□□□□□ -1.2
USP43-205ENST00000574408 F8P00451 2351 aa7.55□□□□□ -1.2
USP43-205ENST00000574408 TMEM263Q8WUH6 116 aaKnown RBP7.55□□□□□ -1.2
USP43-205ENST00000574408 IGHV3-53P01767 116 aa7.55□□□□□ -1.2
USP43-205ENST00000574408 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
USP43-205ENST00000574408 ATRQ13535 2644 aa7.55□□□□□ -1.2
USP43-205ENST00000574408 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
USP43-205ENST00000574408 Q6ZTI0 123 aa7.54□□□□□ -1.2
USP43-205ENST00000574408 IL17DQ8TAD2 202 aa7.54□□□□□ -1.2
USP43-205ENST00000574408 IGLV4-69A0A075B6H9 119 aa7.54□□□□□ -1.2
USP43-205ENST00000574408 PLEKHB2Q96CS7 222 aa7.54□□□□□ -1.2
USP43-205ENST00000574408 F8W1H4 67 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 PHLDA1Q8WV24 401 aaPredicted RBP7.53□□□□□ -1.2
USP43-205ENST00000574408 NOP10Q9NPE3 64 aaKnown RBP7.53□□□□□ -1.2
USP43-205ENST00000574408 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms