RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 FHITP49789 147 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 RASL11AQ6T310 242 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 S100ZQ8WXG8 99 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 TCEAL7Q9BRU2 100 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 MAP1LC3BQ9GZQ8 125 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 PSORS1C2Q9UIG4 136 aa10.14□□□□□ -0.79
HERC1-207ENST00000560316 TRAV26-2A0A0B4J265 109 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 CACNG7P62955 275 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 FOXI1Q12951 378 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 COTL1Q14019 142 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 AKR1C8PQ5T2L2 129 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
HERC1-207ENST00000560316 LOC100996750A0A140TA64 210 aa10.12□□□□□ -0.79
HERC1-207ENST00000560316 BAGE2Q86Y30 109 aa10.12□□□□□ -0.79
HERC1-207ENST00000560316 KRTAP4-6Q9BYQ5 205 aa10.12□□□□□ -0.79
HERC1-207ENST00000560316 PKIGQ9Y2B9 76 aa10.12□□□□□ -0.79
HERC1-207ENST00000560316 PAGE4O60829 102 aa10.11□□□□□ -0.79
HERC1-207ENST00000560316 Q5BKY6 102 aa10.11□□□□□ -0.79
HERC1-207ENST00000560316 NIT2Q9NQR4 276 aa10.11□□□□□ -0.79
HERC1-207ENST00000560316 BORCS7-ASMTA0A0B4J1R7 106 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 A0A1W2PNN7 141 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 MT-ND6P03923 174 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 S100A9P06702 114 aaKnown RBP10.1□□□□□ -0.79
HERC1-207ENST00000560316 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 PRR4Q16378 134 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
HERC1-207ENST00000560316 XCL1P47992 114 aa10.09□□□□□ -0.79
HERC1-207ENST00000560316 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
HERC1-207ENST00000560316 RNASEKQ6P5S7 137 aaKnown RBP10.09□□□□□ -0.79
HERC1-207ENST00000560316 LINC00299Q6ZSB3 139 aa10.09□□□□□ -0.79
HERC1-207ENST00000560316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
HERC1-207ENST00000560316 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
HERC1-207ENST00000560316 IGLC6P0CF74 106 aa10.08□□□□□ -0.8
HERC1-207ENST00000560316 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
HERC1-207ENST00000560316 FER1L6-AS1Q8NA97 138 aa10.08□□□□□ -0.8
HERC1-207ENST00000560316 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
HERC1-207ENST00000560316 NDUFA13Q9P0J0 144 aa10.07□□□□□ -0.8
HERC1-207ENST00000560316 Q6ZNX1 250 aa10.06□□□□□ -0.8
HERC1-207ENST00000560316 MED28Q9H204 178 aa10.06□□□□□ -0.8
HERC1-207ENST00000560316 ALG5Q9Y673 324 aa10.06□□□□□ -0.8
HERC1-207ENST00000560316 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
HERC1-207ENST00000560316 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
HERC1-207ENST00000560316 CCL25O15444 150 aa10.05□□□□□ -0.8
HERC1-207ENST00000560316 FGF6P10767 208 aa10.05□□□□□ -0.8
HERC1-207ENST00000560316 NTF3P20783 257 aa10.05□□□□□ -0.8
HERC1-207ENST00000560316 DEFA1P59665 94 aa10.05□□□□□ -0.8
HERC1-207ENST00000560316 PHF5AQ7RTV0 110 aaKnown RBP10.05□□□□□ -0.8
HERC1-207ENST00000560316 A0A1B0GV50 99 aa10.04□□□□□ -0.8
HERC1-207ENST00000560316 BCL2P10415 239 aa10.04□□□□□ -0.8
HERC1-207ENST00000560316 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
HERC1-207ENST00000560316 OR2D3Q8NGH3 330 aa10.04□□□□□ -0.8
HERC1-207ENST00000560316 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
HERC1-207ENST00000560316 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
HERC1-207ENST00000560316 FXYD6-FXYD2A0A087WZ82 144 aa10.03□□□□□ -0.8
HERC1-207ENST00000560316 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
HERC1-207ENST00000560316 TRGC1P0CF51 173 aa10.03□□□□□ -0.8
HERC1-207ENST00000560316 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
HERC1-207ENST00000560316 TMUB2Q71RG4 321 aa10.03□□□□□ -0.8
HERC1-207ENST00000560316 PFDN1O60925 122 aa10.02□□□□□ -0.81
HERC1-207ENST00000560316 IGLV7-43P04211 117 aa10.02□□□□□ -0.81
HERC1-207ENST00000560316 CAMPP49913 170 aa10.02□□□□□ -0.81
HERC1-207ENST00000560316 GATD1Q8NB37 220 aa10.02□□□□□ -0.81
HERC1-207ENST00000560316 APCSP02743 223 aa10.01□□□□□ -0.81
HERC1-207ENST00000560316 RPL35P42766 123 aaKnown RBP10.01□□□□□ -0.81
HERC1-207ENST00000560316 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
HERC1-207ENST00000560316 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
HERC1-207ENST00000560316 IGLV4-69A0A075B6H9 119 aa10□□□□□ -0.81
HERC1-207ENST00000560316 H0Y9J4 135 aa10□□□□□ -0.81
HERC1-207ENST00000560316 H7C423 109 aa10□□□□□ -0.81
HERC1-207ENST00000560316 SFT2D1Q8WV19 159 aa10□□□□□ -0.81
HERC1-207ENST00000560316 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
HERC1-207ENST00000560316 IGLV1-50A0A075B6I6 118 aa9.99□□□□□ -0.81
HERC1-207ENST00000560316 F2Z2F3 143 aa9.99□□□□□ -0.81
HERC1-207ENST00000560316 NCR2O95944 276 aa9.99□□□□□ -0.81
HERC1-207ENST00000560316 NUP35Q8NFH5 326 aa9.99□□□□□ -0.81
HERC1-207ENST00000560316 ISOC2Q96AB3 205 aa9.99□□□□□ -0.81
HERC1-207ENST00000560316 C19orf71A6NCJ1 209 aa9.98□□□□□ -0.81
HERC1-207ENST00000560316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.98□□□□□ -0.81
HERC1-207ENST00000560316 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
HERC1-207ENST00000560316 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
HERC1-207ENST00000560316 MEF2BQ02080 365 aaPredicted RBP9.98□□□□□ -0.81
HERC1-207ENST00000560316 RPL18AQ02543 176 aaKnown RBP9.98□□□□□ -0.81
HERC1-207ENST00000560316 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
HERC1-207ENST00000560316 BTF3L4Q96K17 158 aa9.98□□□□□ -0.81
HERC1-207ENST00000560316 CYTL1Q9NRR1 136 aa9.98□□□□□ -0.81
HERC1-207ENST00000560316 APOMO95445 188 aa9.97□□□□□ -0.81
HERC1-207ENST00000560316 GIPP09681 153 aaPredicted RBP9.97□□□□□ -0.81
HERC1-207ENST00000560316 SS18Q15532 418 aa9.97□□□□□ -0.81
HERC1-207ENST00000560316 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
HERC1-207ENST00000560316 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
HERC1-207ENST00000560316 A0A087WZ39 114 aa9.96□□□□□ -0.82
HERC1-207ENST00000560316 IFNA1P01562 189 aa9.96□□□□□ -0.82
HERC1-207ENST00000560316 EIF5AP63241 154 aaKnown RBP9.96□□□□□ -0.82
HERC1-207ENST00000560316 CENPWQ5EE01 88 aa9.96□□□□□ -0.82
HERC1-207ENST00000560316 KCNRGQ8N5I3 272 aa9.96□□□□□ -0.82
HERC1-207ENST00000560316 FAM213BQ8TBF2 198 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms