RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 A0A096LPF7 62 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 TEX48A0A1B0GUV7 120 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 KIR2DL4Q99706 377 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 PAX4O43316 350 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 NUDT3O95989 172 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 FCER1GP30273 86 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
CHRNA3-206ENST00000559658 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
CHRNA3-206ENST00000559658 SPATA12Q7Z6I5 190 aa12.09□□□□□ -0.47
CHRNA3-206ENST00000559658 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
CHRNA3-206ENST00000559658 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
CHRNA3-206ENST00000559658 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
CHRNA3-206ENST00000559658 C2orf66Q6UXQ4 117 aa12.07□□□□□ -0.48
CHRNA3-206ENST00000559658 C3orf79P0CE67 100 aa12.06□□□□□ -0.48
CHRNA3-206ENST00000559658 KRTDAPP60985 99 aa12.06□□□□□ -0.48
CHRNA3-206ENST00000559658 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
CHRNA3-206ENST00000559658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
CHRNA3-206ENST00000559658 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
CHRNA3-206ENST00000559658 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
CHRNA3-206ENST00000559658 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
CHRNA3-206ENST00000559658 H0Y8G0 127 aa12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 K7EMI3 77 aa12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 COTL1Q14019 142 aa12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 DEFB131BA0A096LNP1 70 aa12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 Q8N976 141 aa12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 C20orf203Q8NBC4 194 aa12.04□□□□□ -0.48
CHRNA3-206ENST00000559658 OPRPNQ99935 248 aaPredicted RBP12.03□□□□□ -0.48
CHRNA3-206ENST00000559658 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.48
CHRNA3-206ENST00000559658 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.49
CHRNA3-206ENST00000559658 IFI27L1Q96BM0 104 aa12.02□□□□□ -0.49
CHRNA3-206ENST00000559658 CYSLTR1Q9Y271 337 aa12.02□□□□□ -0.49
CHRNA3-206ENST00000559658 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
CHRNA3-206ENST00000559658 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
CHRNA3-206ENST00000559658 HSPB8Q9UJY1 196 aa12.01□□□□□ -0.49
CHRNA3-206ENST00000559658 CSMD3Q7Z407 3707 aa12□□□□□ -0.49
CHRNA3-206ENST00000559658 IGIPA6NJ69 53 aa12□□□□□ -0.49
CHRNA3-206ENST00000559658 SCGB3A1Q96QR1 104 aa12□□□□□ -0.49
CHRNA3-206ENST00000559658 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
CHRNA3-206ENST00000559658 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
CHRNA3-206ENST00000559658 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
CHRNA3-206ENST00000559658 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
CHRNA3-206ENST00000559658 TGP01266 2768 aa11.98□□□□□ -0.49
CHRNA3-206ENST00000559658 TRBV6-8A0A0A6YYG3 113 aa11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 NHLRC4P0CG21 123 aaPredicted RBP11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 MAP1LC3CQ9BXW4 147 aa11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 TRAV10A0A0B4J240 114 aa11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 SCGB1D1O95968 90 aa11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 ERASQ7Z444 233 aa11.97□□□□□ -0.49
CHRNA3-206ENST00000559658 MRPL23Q16540 153 aaKnown RBP11.96□□□□□ -0.49
CHRNA3-206ENST00000559658 ATOH7Q8N100 152 aa11.96□□□□□ -0.49
CHRNA3-206ENST00000559658 Q8N3U1 123 aa11.96□□□□□ -0.49
CHRNA3-206ENST00000559658 BAALCQ8WXS3 180 aa11.96□□□□□ -0.49
CHRNA3-206ENST00000559658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 ATP5LO75964 103 aa11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 GAGE6Q13070 117 aa11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 Q6ZUT4 128 aa11.95□□□□□ -0.5
CHRNA3-206ENST00000559658 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
CHRNA3-206ENST00000559658 H3BNG1 76 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 PRSS1P07477 247 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 FGF6P10767 208 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 DNAH7Q8WXX0 4024 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 SMIM6P0DI80 62 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 ODF1Q14990 250 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 LINC01545Q5VT33 79 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
CHRNA3-206ENST00000559658 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
CHRNA3-206ENST00000559658 LYPD5Q6UWN5 251 aa11.92□□□□□ -0.5
CHRNA3-206ENST00000559658 Q6ZN92 141 aa11.92□□□□□ -0.5
CHRNA3-206ENST00000559658 LYSTQ99698 3801 aa11.92□□□□□ -0.5
CHRNA3-206ENST00000559658 PET117Q6UWS5 81 aa11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 LINC00518Q8N0U6 118 aa11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 C12orf57Q99622 126 aa11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 DYNC2H1Q8NCM8 4307 aaKnown RBP11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 IGLL5B9A064 214 aa11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 G0S2P27469 103 aa11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
CHRNA3-206ENST00000559658 STARD9Q9P2P6 4700 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 IGLV4-60A0A075B6I1 120 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 UBE2L6O14933 153 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 MPV17L2Q567V2 206 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
CHRNA3-206ENST00000559658 ESRGQ1W209 222 aa11.89□□□□□ -0.51
CHRNA3-206ENST00000559658 MRPL52Q86TS9 123 aaKnown RBP11.89□□□□□ -0.51
CHRNA3-206ENST00000559658 CST9LQ9H4G1 147 aa11.89□□□□□ -0.51
CHRNA3-206ENST00000559658 A0A087WX48 190 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms