RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 LINC00526Q96FQ7 95 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 MT-ND6P03923 174 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 IGLC6P0CF74 106 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 FHITP49789 147 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 DEFA3P59666 94 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 C9orf116Q5BN46 136 aaPredicted RBP4.47□□□□□ -1.69
HMG20A-207ENST00000559035 C1orf137Q5JT78 98 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 RASL11AQ6T310 242 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 KRTAP11-1Q8IUC1 163 aa4.47□□□□□ -1.69
HMG20A-207ENST00000559035 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.46□□□□□ -1.7
HMG20A-207ENST00000559035 UBE2L6O14933 153 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 MGPP08493 103 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 SMIM17P0DL12 118 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 AKR1C3P42330 323 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 MEF2BQ02080 365 aaPredicted RBP4.46□□□□□ -1.7
HMG20A-207ENST00000559035 SYCNQ0VAF6 134 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 COTL1Q14019 142 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 MZT2BQ6NZ67 158 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 PHF5AQ7RTV0 110 aaKnown RBP4.46□□□□□ -1.7
HMG20A-207ENST00000559035 NIT2Q9NQR4 276 aa4.46□□□□□ -1.7
HMG20A-207ENST00000559035 A6NHS1 94 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 INMT-MINDY4F8WBC2 141 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 BCL2P10415 239 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 CAMPP49913 170 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 Q6ZNX1 250 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 OR5A1Q8NGJ0 315 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 ENKURQ8TC29 256 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 MARVELD1Q9BSK0 173 aa4.45□□□□□ -1.7
HMG20A-207ENST00000559035 LINC00959A0A1B0GUT2 108 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 H7C423 109 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 CCL25O15444 150 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 APOMO95445 188 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 NTF3P20783 257 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 RPL13AP40429 203 aaKnown RBP4.44□□□□□ -1.7
HMG20A-207ENST00000559035 XCL1P47992 114 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
HMG20A-207ENST00000559035 IGLV4-69A0A075B6H9 119 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.43□□□□□ -1.7
HMG20A-207ENST00000559035 SCO2A0A1W2PP80 73 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 IGKV2-29A2NJV5 120 aaPredicted RBP4.43□□□□□ -1.7
HMG20A-207ENST00000559035 MAP1LC3B2A6NCE7 125 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 SSNA1O43805 119 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 NCR2O95944 276 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 FGF6P10767 208 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 ZNF25P17030 456 aaPredicted RBP4.43□□□□□ -1.7
HMG20A-207ENST00000559035 SSTP61278 116 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 IFITM3Q01628 133 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 RPL7L1Q6DKI1 246 aaKnown RBP4.43□□□□□ -1.7
HMG20A-207ENST00000559035 MAP1LC3BQ9GZQ8 125 aa4.43□□□□□ -1.7
HMG20A-207ENST00000559035 UPK1BO75841 260 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 S100A9P06702 114 aaKnown RBP4.42□□□□□ -1.7
HMG20A-207ENST00000559035 AMMECR1LQ6DCA0 310 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 CD164L2Q6UWJ8 174 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 BAGE2Q86Y30 109 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 GATD1Q8NB37 220 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 STOML3Q8TAV4 291 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 ISOC2Q96AB3 205 aa4.42□□□□□ -1.7
HMG20A-207ENST00000559035 RPP21Q9H633 154 aaKnown RBP4.42□□□□□ -1.7
HMG20A-207ENST00000559035 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
HMG20A-207ENST00000559035 TRAV1-1A0A0B4J248 108 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 ZNF561-AS1K7EIQ3 104 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 PAGE4O60829 102 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 ESDP10768 282 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 UBE2D1P51668 147 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 CST9LP1Q5W188 147 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 RNASEKQ6P5S7 137 aaKnown RBP4.41□□□□□ -1.7
HMG20A-207ENST00000559035 LINC00299Q6ZSB3 139 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 CNFNQ9BYD5 112 aa4.41□□□□□ -1.7
HMG20A-207ENST00000559035 FAM168BA1KXE4 195 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 BCL2L11O43521 198 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 APCSP02743 223 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 TRGC1P0CF51 173 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 CTRLP40313 264 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
HMG20A-207ENST00000559035 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 AKR1C8PQ5T2L2 129 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 MRPL52Q86TS9 123 aaKnown RBP4.4□□□□□ -1.71
HMG20A-207ENST00000559035 C2orf48Q96LS8 159 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 TPPP3Q9BW30 176 aa4.4□□□□□ -1.71
HMG20A-207ENST00000559035 A0A087WZ39 114 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 RPS20P60866 119 aaKnown RBP4.39□□□□□ -1.71
HMG20A-207ENST00000559035 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
HMG20A-207ENST00000559035 Q5BKY6 102 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 OR2D3Q8NGH3 330 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 TSKUQ8WUA8 353 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 C11orf52Q96A22 123 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 RPL39LQ96EH5 51 aaKnown RBP4.39□□□□□ -1.71
HMG20A-207ENST00000559035 CAMK2N2Q96S95 79 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 CDC42SE2Q9NRR3 84 aa4.39□□□□□ -1.71
HMG20A-207ENST00000559035 A0A087X002 238 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 BORCS7-ASMTA0A0B4J1R7 106 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 F2Z2F3 143 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms