RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ZMAT4Q9H898 229 aa8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 TRBV6-5A0A0K0K1A5 114 aa8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 AJUBAQ96IF1 538 aa8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 IGKV2D-24A0A075B6R9 120 aa8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 IGLV1-47P01700 117 aa8.9□□□□□ -0.98
CSPG4P12-201ENST00000558282 PPDPFQ9H3Y8 114 aa8.9□□□□□ -0.98
CSPG4P12-201ENST00000558282 EIF4EBP1Q13541 118 aaPredicted RBP8.9□□□□□ -0.98
CSPG4P12-201ENST00000558282 IGFL3Q6UXB1 125 aa8.9□□□□□ -0.99
CSPG4P12-201ENST00000558282 LINC00574Q9H8X3 128 aa8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 COL4A4P53420 1690 aaPredicted RBP8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 HTTP42858 3142 aa8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 Q8N9W7 124 aa8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 TNRC6BQ9UPQ9 1833 aaKnown RBP8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 CRIP1P50238 77 aa8.89□□□□□ -0.99
CSPG4P12-201ENST00000558282 SLPIP03973 132 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 CEMP1Q6PRD7 247 aaPredicted RBP8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 ARHGAP21Q5T5U3 1957 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 HELZP42694 1942 aaKnown RBP8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 IGLV10-54A0A075B6I4 117 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 SCXQ7RTU7 201 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 TRBV7-7A0A0K0K1E9 115 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 H0Y9J4 135 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 ZFAND2AQ8N6M9 145 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 NRACQ8N912 160 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 PRORYQ9H606 182 aa8.88□□□□□ -0.99
CSPG4P12-201ENST00000558282 TMEM89A2RUT3 159 aa8.87□□□□□ -0.99
CSPG4P12-201ENST00000558282 Q6ZPA2 131 aa8.87□□□□□ -0.99
CSPG4P12-201ENST00000558282 CCKP06307 115 aa8.87□□□□□ -0.99
CSPG4P12-201ENST00000558282 IGKV4-1P06312 121 aa8.87□□□□□ -0.99
CSPG4P12-201ENST00000558282 ANAPC1Q9H1A4 1944 aa8.87□□□□□ -0.99
CSPG4P12-201ENST00000558282 WNK1Q9H4A3 2382 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 SEM1Q6ZVN7 128 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 IGHV4OR15-8A0A075B7B6 117 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 A0A087WW49 117 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 IGLV2-11P01706 119 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 MALRD1Q5VYJ5 2156 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 CGB3P0DN86 165 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 CGB7P0DN87 165 aa8.86□□□□□ -0.99
CSPG4P12-201ENST00000558282 CNFNQ9BYD5 112 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 OBSL1O75147 1896 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 Q6ZS46 218 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 NOTCH4Q99466 2003 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 M0QY20 66 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 PLA2G5P39877 138 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 LTBP2Q14767 1821 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 CRIP3Q6Q6R5 217 aa8.85□□□□□ -0.99
CSPG4P12-201ENST00000558282 C5orf56Q8N8D9 126 aa8.84□□□□□ -0.99
CSPG4P12-201ENST00000558282 LINC00467Q9BRT7 94 aa8.84□□□□□ -0.99
CSPG4P12-201ENST00000558282 FAM215AQ9Y5M1 114 aa8.84□□□□□ -0.99
CSPG4P12-201ENST00000558282 PRR14LQ5THK1 2151 aa8.83□□□□□ -1
CSPG4P12-201ENST00000558282 C6orf99Q4VX62 202 aa8.83□□□□□ -1
CSPG4P12-201ENST00000558282 APRG1Q8IVJ8 170 aa8.83□□□□□ -1
CSPG4P12-201ENST00000558282 CRYGAP11844 174 aa8.83□□□□□ -1
CSPG4P12-201ENST00000558282 SPRNQ5BIV9 151 aa8.83□□□□□ -1
CSPG4P12-201ENST00000558282 GTF3C1Q12789 2109 aa8.83□□□□□ -1
CSPG4P12-201ENST00000558282 EBI3Q14213 229 aa8.82□□□□□ -1
CSPG4P12-201ENST00000558282 MED13Q9UHV7 2174 aa8.82□□□□□ -1
CSPG4P12-201ENST00000558282 SOSTDC1Q6X4U4 206 aa8.82□□□□□ -1
CSPG4P12-201ENST00000558282 FREM1Q5H8C1 2179 aa8.82□□□□□ -1
CSPG4P12-201ENST00000558282 ZGRF1Q86YA3 2104 aa8.82□□□□□ -1
CSPG4P12-201ENST00000558282 KLK5Q9Y337 293 aaPredicted RBP8.82□□□□□ -1
CSPG4P12-201ENST00000558282 SPART-AS1P0CW21 52 aa8.81□□□□□ -1
CSPG4P12-201ENST00000558282 POLR2KP53803 58 aaKnown RBP8.81□□□□□ -1
CSPG4P12-201ENST00000558282 LY6G6EA0A0G2JKS1 128 aa8.81□□□□□ -1
CSPG4P12-201ENST00000558282 PRYO14603 147 aa8.81□□□□□ -1
CSPG4P12-201ENST00000558282 U3KQA8 63 aa8.81□□□□□ -1
CSPG4P12-201ENST00000558282 ZFHX2Q9C0A1 2572 aaPredicted RBP8.81□□□□□ -1
CSPG4P12-201ENST00000558282 MUC7Q8TAX7 377 aa8.81□□□□□ -1
CSPG4P12-201ENST00000558282 SMIM11BQ8TCY0 68 aa8.81□□□□□ -1
CSPG4P12-201ENST00000558282 LY6DQ14210 128 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 CASC2Q6XLA1 102 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 ZFAND3Q9H8U3 227 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 THADAQ6YHU6 1953 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 Q8N9L7 120 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 PRO0255Q9UI72 69 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 DYSFO75923 2080 aa8.8□□□□□ -1
CSPG4P12-201ENST00000558282 ZNF106Q9H2Y7 1883 aaKnown RBP8.79□□□□□ -1
CSPG4P12-201ENST00000558282 CRIP2P52943 208 aaPredicted RBP8.79□□□□□ -1
CSPG4P12-201ENST00000558282 VPREB1P12018 145 aa8.79□□□□□ -1
CSPG4P12-201ENST00000558282 PCNX2A6NKB5 2137 aa8.79□□□□□ -1
CSPG4P12-201ENST00000558282 NCOA6Q14686 2063 aaPredicted RBP8.79□□□□□ -1
CSPG4P12-201ENST00000558282 DSCAML1Q8TD84 2053 aa8.79□□□□□ -1
CSPG4P12-201ENST00000558282 CCL24O00175 119 aa8.79□□□□□ -1
CSPG4P12-201ENST00000558282 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
CSPG4P12-201ENST00000558282 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.79□□□□□ -1
CSPG4P12-201ENST00000558282 TSHBP01222 138 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 Q6ZQY7 126 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 SIRPDQ9H106 197 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 A0A087WVE0 104 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 Q8N7P7 452 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
CSPG4P12-201ENST00000558282 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms