RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SLC38A11Q08AI6 406 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 SLC25A29Q8N8R3 303 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 OR5C1Q8NGR4 320 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 AQP10Q96PS8 301 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 SH3BGRL3Q9H299 93 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 SND1-IT1Q9HBX3 110 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 C8orf17Q9NRJ1 99 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 NDUFA4L2Q9NRX3 87 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 LYRM2Q9NU23 88 aaPredicted RBP3.36□□□□□ -1.87
RTF1-204ENST00000558117 BET1LQ9NYM9 111 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 CARHSP1Q9Y2V2 147 aaKnown RBP3.36□□□□□ -1.87
RTF1-204ENST00000558117 ZNF706Q9Y5V0 76 aaPredicted RBP3.36□□□□□ -1.87
RTF1-204ENST00000558117 BORCS7-ASMTA0A0B4J1R7 106 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 PIGBOS1A0A0B4J2F0 54 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 A0A1B0GV50 99 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 TLX1NBP0CAT3 122 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 RNASE2P10153 161 aaKnown RBP3.35□□□□□ -1.87
RTF1-204ENST00000558117 ATP5G3P48201 142 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 TAS2R30P59541 319 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 RAB2AP61019 212 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 PRCDQ00LT1 54 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 WFDC2Q14508 124 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 KLK9Q2XQG4 91 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 TEX261Q6UWH6 196 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 TMEM14EPQ6UXP3 125 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 Q8N976 141 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 OR4X1Q8NH49 305 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 VSTM2AQ8TAG5 236 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 GNPNAT1Q96EK6 184 aaPredicted RBP3.35□□□□□ -1.87
RTF1-204ENST00000558117 ACY3Q96HD9 319 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 SIGMAR1Q99720 223 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 FKBP11Q9NYL4 201 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 KLK9Q9UKQ9 250 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 U3KQ87 197 aa3.35□□□□□ -1.87
RTF1-204ENST00000558117 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 UBE2L5PA0A1B0GUS4 154 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 IGLC7A0M8Q6 106 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 SCGB1C2P0DMR2 95 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 DEFB130BP0DP73 79 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 DEFB130AP0DP74 79 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 ESDP10768 282 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 DEFA4P12838 97 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 TPT1P13693 172 aaKnown RBP3.34□□□□□ -1.87
RTF1-204ENST00000558117 FGF7P21781 194 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 ATP6V0CP27449 155 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 CRYBA4P53673 196 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 ERHP84090 104 aaKnown RBP3.34□□□□□ -1.87
RTF1-204ENST00000558117 ZNF345Q14585 488 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
RTF1-204ENST00000558117 BAP18Q8IXM2 172 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 OR10P1Q8NGE3 313 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 SCGB1C1Q8TD33 95 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 CIB3Q96Q77 187 aaPredicted RBP3.34□□□□□ -1.87
RTF1-204ENST00000558117 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 UQCC1Q9NVA1 299 aa3.34□□□□□ -1.87
RTF1-204ENST00000558117 MRPL36Q9P0J6 103 aaKnown RBP3.34□□□□□ -1.87
RTF1-204ENST00000558117 IGHV3-49A0A0A0MS15 119 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 TRBV7-1A0A0A6YYK4 115 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 IGHV7-4-1A0A0J9YVY3 117 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 BPY2O14599 106 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 HMGB3O15347 200 aaKnown RBP3.33□□□□□ -1.88
RTF1-204ENST00000558117 PSCAO43653 123 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 MT-CO2P00403 227 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 IFNA7P01567 189 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 AKR1C1Q04828 323 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 JOSD1Q15040 202 aaPredicted RBP3.33□□□□□ -1.88
RTF1-204ENST00000558117 IBA57Q5T440 356 aaKnown RBP3.33□□□□□ -1.88
RTF1-204ENST00000558117 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 TCF24Q7RTU0 167 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 PCP2Q8IVA1 136 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.33□□□□□ -1.88
RTF1-204ENST00000558117 OR4B1Q8NGF8 309 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 GINS3Q9BRX5 216 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 TMEM147Q9BVK8 224 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 DOK5Q9P104 306 aa3.33□□□□□ -1.88
RTF1-204ENST00000558117 A0A0J9YY99 117 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 C9JQL5 133 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 NDUFA4O00483 81 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 CRYGDP07320 174 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 OR10J1P30954 320 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 OPRK1P41145 380 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 CCL20P78556 96 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 ZNF90Q03938 601 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 BATFQ16520 125 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 C1orf194Q5T5A4 169 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 FAM78BQ5VT40 261 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 MIC13Q5XKP0 118 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 LCN15Q6UWW0 184 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 FA2HQ7L5A8 372 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 ORMDL3Q8N138 153 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 ZNF709Q8N972 641 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 TMEM75Q8N9X5 138 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 MGST2Q99735 147 aa3.32□□□□□ -1.88
RTF1-204ENST00000558117 WDR61Q9GZS3 305 aaKnown RBP3.32□□□□□ -1.88
RTF1-204ENST00000558117 CACFD1Q9UGQ2 172 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms