RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-223	ENST00000557294	CARD19	Q96LW7	228 aa		11.14	□□□□□ -0.63
PRKCH-223	ENST00000557294	MED28	Q9H204	178 aa		11.14	□□□□□ -0.63
PRKCH-223	ENST00000557294	AMT	P48728	403 aa		11.13	□□□□□ -0.63
PRKCH-223	ENST00000557294	PTTG1IP	P53801	180 aa		11.13	□□□□□ -0.63
PRKCH-223	ENST00000557294	RASL11A	Q6T310	242 aa		11.13	□□□□□ -0.63
PRKCH-223	ENST00000557294	MLST8	Q9BVC4	326 aa		11.13	□□□□□ -0.63
PRKCH-223	ENST00000557294	NIT2	Q9NQR4	276 aa		11.13	□□□□□ -0.63
PRKCH-223	ENST00000557294		A0A1W2PNN7	141 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	AKR1C3	P42330	323 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	COTL1	Q14019	142 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	C1orf137	Q5JT78	98 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	FER1L6-AS1	Q8NA97	138 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	DIRC1	Q969H9	104 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	LINC00526	Q96FQ7	95 aa		11.12	□□□□□ -0.63
PRKCH-223	ENST00000557294	S100A9	P06702	114 aa	Known RBP	11.11	□□□□□ -0.63
PRKCH-223	ENST00000557294	IGHV1-58	A0A0C4DH39	117 aa		11.1	□□□□□ -0.63
PRKCH-223	ENST00000557294	SYCN	Q0VAF6	134 aa		11.1	□□□□□ -0.63
PRKCH-223	ENST00000557294	GAGE2B	Q13066	116 aa		11.1	□□□□□ -0.63
PRKCH-223	ENST00000557294	CST9LP1	Q5W188	147 aa		11.1	□□□□□ -0.63
PRKCH-223	ENST00000557294	STOML3	Q8TAV4	291 aa		11.1	□□□□□ -0.63
PRKCH-223	ENST00000557294	IGLV1-50	A0A075B6I6	118 aa		11.09	□□□□□ -0.63
PRKCH-223	ENST00000557294	BAGE2	Q86Y30	109 aa		11.09	□□□□□ -0.63
PRKCH-223	ENST00000557294	AMMECR1L	Q6DCA0	310 aa		11.08	□□□□□ -0.64
PRKCH-223	ENST00000557294	LOC107984640	A0A0U1RRK4	108 aa		11.07	□□□□□ -0.64
PRKCH-223	ENST00000557294	ZNF561-AS1	K7EIQ3	104 aa		11.07	□□□□□ -0.64
PRKCH-223	ENST00000557294	IGLV7-43	P04211	117 aa		11.07	□□□□□ -0.64
PRKCH-223	ENST00000557294	RPL7L1	Q6DKI1	246 aa	Known RBP	11.07	□□□□□ -0.64
PRKCH-223	ENST00000557294	BATF3	Q9NR55	127 aa		11.07	□□□□□ -0.64
PRKCH-223	ENST00000557294	MAP1LC3B2	A6NCE7	125 aa		11.06	□□□□□ -0.64
PRKCH-223	ENST00000557294		H7C423	109 aa		11.06	□□□□□ -0.64
PRKCH-223	ENST00000557294	XCL1	P47992	114 aa		11.06	□□□□□ -0.64
PRKCH-223	ENST00000557294	RNASEK	Q6P5S7	137 aa	Known RBP	11.06	□□□□□ -0.64
PRKCH-223	ENST00000557294	MAP1LC3B	Q9GZQ8	125 aa		11.06	□□□□□ -0.64
PRKCH-223	ENST00000557294		H0Y9J4	135 aa		11.05	□□□□□ -0.64
PRKCH-223	ENST00000557294	IGLC6	P0CF74	106 aa		11.05	□□□□□ -0.64
PRKCH-223	ENST00000557294	C9orf116	Q5BN46	136 aa	Predicted RBP	11.05	□□□□□ -0.64
PRKCH-223	ENST00000557294	OR5A1	Q8NGJ0	315 aa		11.05	□□□□□ -0.64
PRKCH-223	ENST00000557294	FGF6	P10767	208 aa		11.04	□□□□□ -0.64
PRKCH-223	ENST00000557294	NTF3	P20783	257 aa		11.04	□□□□□ -0.64
PRKCH-223	ENST00000557294	AKR1C8P	Q5T2L2	129 aa		11.04	□□□□□ -0.64
PRKCH-223	ENST00000557294	PHF5A	Q7RTV0	110 aa	Known RBP	11.04	□□□□□ -0.64
PRKCH-223	ENST00000557294	ISOC2	Q96AB3	205 aa		11.04	□□□□□ -0.64
PRKCH-223	ENST00000557294	TPPP3	Q9BW30	176 aa		11.04	□□□□□ -0.64
PRKCH-223	ENST00000557294	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.03	□□□□□ -0.64
PRKCH-223	ENST00000557294	LINC00959	A0A1B0GUT2	108 aa		11.03	□□□□□ -0.64
PRKCH-223	ENST00000557294	CCL25	O15444	150 aa		11.03	□□□□□ -0.64
PRKCH-223	ENST00000557294	PAGE4	O60829	102 aa		11.03	□□□□□ -0.64
PRKCH-223	ENST00000557294	ALG5	Q9Y673	324 aa		11.03	□□□□□ -0.64
PRKCH-223	ENST00000557294	TRAV1-1	A0A0B4J248	108 aa		11.02	□□□□□ -0.65
PRKCH-223	ENST00000557294	KRTAP1-4	P0C5Y4	121 aa		11.02	□□□□□ -0.65
PRKCH-223	ENST00000557294	CAMP	P49913	170 aa		11.02	□□□□□ -0.65
PRKCH-223	ENST00000557294	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.01	□□□□□ -0.65
PRKCH-223	ENST00000557294	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.01	□□□□□ -0.65
PRKCH-223	ENST00000557294	NCR2	O95944	276 aa		11.01	□□□□□ -0.65
PRKCH-223	ENST00000557294	TRGC1	P0CF51	173 aa		11.01	□□□□□ -0.65
PRKCH-223	ENST00000557294		Q6ZNX1	250 aa		11.01	□□□□□ -0.65
PRKCH-223	ENST00000557294	SCO2	A0A1W2PP80	73 aa		11	□□□□□ -0.65
PRKCH-223	ENST00000557294		F2Z2F3	143 aa		11	□□□□□ -0.65
PRKCH-223	ENST00000557294	BCL2	P10415	239 aa		11	□□□□□ -0.65
PRKCH-223	ENST00000557294	ZNF25	P17030	456 aa	Predicted RBP	11	□□□□□ -0.65
PRKCH-223	ENST00000557294	CD164L2	Q6UWJ8	174 aa		11	□□□□□ -0.65
PRKCH-223	ENST00000557294	TMUB2	Q71RG4	321 aa		11	□□□□□ -0.65
PRKCH-223	ENST00000557294	NUP35	Q8NFH5	326 aa		11	□□□□□ -0.65
PRKCH-223	ENST00000557294	IGLV4-69	A0A075B6H9	119 aa		10.99	□□□□□ -0.65
PRKCH-223	ENST00000557294	APOM	O95445	188 aa		10.99	□□□□□ -0.65
PRKCH-223	ENST00000557294	RPL13A	P40429	203 aa	Known RBP	10.99	□□□□□ -0.65
PRKCH-223	ENST00000557294	UBE2D1	P51668	147 aa		10.99	□□□□□ -0.65
PRKCH-223	ENST00000557294	RPS20	P60866	119 aa	Known RBP	10.99	□□□□□ -0.65
PRKCH-223	ENST00000557294	EIF5A	P63241	154 aa	Known RBP	10.99	□□□□□ -0.65
PRKCH-223	ENST00000557294		A0A087WZ39	114 aa		10.98	□□□□□ -0.65
PRKCH-223	ENST00000557294	SS18	Q15532	418 aa		10.98	□□□□□ -0.65
PRKCH-223	ENST00000557294		Q5BKY6	102 aa		10.98	□□□□□ -0.65
PRKCH-223	ENST00000557294	BTF3L4	Q96K17	158 aa		10.98	□□□□□ -0.65
PRKCH-223	ENST00000557294	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.97	□□□□□ -0.65
PRKCH-223	ENST00000557294	APCS	P02743	223 aa		10.97	□□□□□ -0.65
PRKCH-223	ENST00000557294	MEF2B	Q02080	365 aa	Predicted RBP	10.97	□□□□□ -0.65
PRKCH-223	ENST00000557294	GATD1	Q8NB37	220 aa		10.97	□□□□□ -0.65
PRKCH-223	ENST00000557294	OR2D3	Q8NGH3	330 aa		10.97	□□□□□ -0.65
PRKCH-223	ENST00000557294	TMEM101	Q96IK0	257 aa		10.97	□□□□□ -0.65
PRKCH-223	ENST00000557294	LYZL1	Q6UWQ5	148 aa		10.95	□□□□□ -0.66
PRKCH-223	ENST00000557294	TSKU	Q8WUA8	353 aa		10.95	□□□□□ -0.66
PRKCH-223	ENST00000557294	CAMK2N2	Q96S95	79 aa		10.95	□□□□□ -0.66
PRKCH-223	ENST00000557294	PFDN1	O60925	122 aa		10.94	□□□□□ -0.66
PRKCH-223	ENST00000557294	RPL35	P42766	123 aa	Known RBP	10.94	□□□□□ -0.66
PRKCH-223	ENST00000557294	RPL18A	Q02543	176 aa	Known RBP	10.94	□□□□□ -0.66
PRKCH-223	ENST00000557294	EIF5AL1	Q6IS14	154 aa	Known RBP	10.94	□□□□□ -0.66
PRKCH-223	ENST00000557294	KRTAP11-1	Q8IUC1	163 aa		10.94	□□□□□ -0.66
PRKCH-223	ENST00000557294	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.94	□□□□□ -0.66
PRKCH-223	ENST00000557294	FSIP2	Q5CZC0	6907 aa		10.93	□□□□□ -0.66
PRKCH-223	ENST00000557294	C19orf71	A6NCJ1	209 aa		10.93	□□□□□ -0.66
PRKCH-223	ENST00000557294	GIP	P09681	153 aa	Predicted RBP	10.93	□□□□□ -0.66
PRKCH-223	ENST00000557294	MAL	P21145	153 aa		10.93	□□□□□ -0.66
PRKCH-223	ENST00000557294	C9orf62	Q8N4C0	152 aa		10.93	□□□□□ -0.66
PRKCH-223	ENST00000557294	C2orf48	Q96LS8	159 aa		10.93	□□□□□ -0.66
PRKCH-223	ENST00000557294	MUC17	Q685J3	4493 aa		10.92	□□□□□ -0.66
PRKCH-223	ENST00000557294	XKRY2	A2RUG3	117 aa		10.92	□□□□□ -0.66
PRKCH-223	ENST00000557294	SFT2D1	Q8WV19	159 aa		10.92	□□□□□ -0.66
PRKCH-223	ENST00000557294	MBD3L1	Q8WWY6	194 aa		10.92	□□□□□ -0.66
PRKCH-223	ENST00000557294	RPL39L	Q96EH5	51 aa	Known RBP	10.92	□□□□□ -0.66
PRKCH-223	ENST00000557294	CDC42SE2	Q9NRR3	84 aa		10.92	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms