RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TMEM263Q8WUH6 116 aaKnown RBP6.4□□□□□ -1.39
TDP1-210ENST00000554976 SMIM20Q8N5G0 67 aa6.39□□□□□ -1.39
TDP1-210ENST00000554976 A8MWV9 139 aa6.39□□□□□ -1.39
TDP1-210ENST00000554976 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
TDP1-210ENST00000554976 OVOL2Q9BRP0 275 aa6.39□□□□□ -1.39
TDP1-210ENST00000554976 MCRIP2Q9BUT9 160 aaKnown RBP6.39□□□□□ -1.39
TDP1-210ENST00000554976 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
TDP1-210ENST00000554976 ZFP2Q6ZN57 461 aa6.38□□□□□ -1.39
TDP1-210ENST00000554976 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
TDP1-210ENST00000554976 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
TDP1-210ENST00000554976 Q9UF83 564 aa6.38□□□□□ -1.39
TDP1-210ENST00000554976 C2CD3Q4AC94 2353 aa6.38□□□□□ -1.39
TDP1-210ENST00000554976 SORL1Q92673 2214 aa6.38□□□□□ -1.39
TDP1-210ENST00000554976 TSHBP01222 138 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 SAMD5Q5TGI4 173 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 LINC00612Q8N6U2 182 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 B5MCH6 92 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 FGF6P10767 208 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 RPL35AP18077 110 aaKnown RBP6.37□□□□□ -1.39
TDP1-210ENST00000554976 FAM74A4Q5TZK3 123 aa6.37□□□□□ -1.39
TDP1-210ENST00000554976 NAA38Q9BRA0 125 aaKnown RBP6.37□□□□□ -1.39
TDP1-210ENST00000554976 SDHAF1A6NFY7 115 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 IGHV3-53P01767 116 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 P0DMU3 169 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 FAM231AP0DMU4 169 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 FAM231CP0DMU5 169 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 HTN1P15515 57 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 ZNF56Q15929 161 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 C16orf74Q96GX8 76 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 C1QTNF4Q9BXJ3 329 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 X6R8D5 127 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 TRAV12-1A0A0B4J245 112 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 IGIPA6NJ69 53 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 NEXN-AS1Q8NBZ9 246 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 SPANXA1Q9NS26 97 aa6.36□□□□□ -1.39
TDP1-210ENST00000554976 VCYO14598 125 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 DKK2Q9UBU2 259 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 HHLA3Q9XRX5 114 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
TDP1-210ENST00000554976 TRAV4A0A0B4J268 109 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 RHODO00212 210 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 Q6ZTI0 123 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 GTSCR1Q86UQ5 136 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 C18orf15Q96N68 181 aa6.35□□□□□ -1.39
TDP1-210ENST00000554976 EGFEM1PQ0D2K5 195 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 WFDC2Q14508 124 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 RHOHQ15669 191 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 C2orf66Q6UXQ4 117 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 Q6ZUT4 128 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 TM2D2Q9BX73 214 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 WNK1Q9H4A3 2382 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 IGHV3-73A0A0B4J1V6 119 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 ATP5LO75964 103 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 LINC00694P0DN24 101 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 ATP6V0E2Q8NHE4 81 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 BAALCQ8WXS3 180 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
TDP1-210ENST00000554976 A0A087WX48 190 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 F5H697 171 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 C5orf47Q569G3 176 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 KIR2DL5BQ8NHK3 375 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 IGHV3OR16-12A0A075B7B8 117 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 I3L3M4 83 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 H7C1H1 209 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 TIMM17AQ99595 171 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 CHCHD7Q9BUK0 85 aa6.33□□□□□ -1.4
TDP1-210ENST00000554976 NOP10Q9NPE3 64 aaKnown RBP6.33□□□□□ -1.4
TDP1-210ENST00000554976 RPL39P62891 51 aaKnown RBP6.32□□□□□ -1.4
TDP1-210ENST00000554976 F8P00451 2351 aa6.32□□□□□ -1.4
TDP1-210ENST00000554976 LINC01549A6NIU2 74 aa6.32□□□□□ -1.4
TDP1-210ENST00000554976 SH2D6Q7Z4S9 175 aa6.32□□□□□ -1.4
TDP1-210ENST00000554976 C20orf203Q8NBC4 194 aa6.32□□□□□ -1.4
TDP1-210ENST00000554976 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
TDP1-210ENST00000554976 IGLV4-69A0A075B6H9 119 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 TRGV1A0A0A0MS02 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
TDP1-210ENST00000554976 XGP55808 180 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 PRO0461Q9UI25 63 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 BAHCC1Q9P281 2608 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 GAGE12JA6NER3 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 A8MZ25 164 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 E9PLD3 99 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 GAGE7O76087 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 GAGE12FP0CL80 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 GAGE12GP0CL81 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 GAGE12IP0CL82 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 GAGE4Q13068 117 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 PHLDA1Q8WV24 401 aaPredicted RBP6.31□□□□□ -1.4
TDP1-210ENST00000554976 KIR2DL4Q99706 377 aa6.31□□□□□ -1.4
TDP1-210ENST00000554976 K7EQD1 137 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms