RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 TMEM70Q9BUB7 260 aa3.84□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SLC25A22Q9H936 323 aa3.84□□□□□ -1.79
SMARCE1P3-201ENST00000553649 FAM231BA6NCW3 169 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CD3DP04234 171 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 RPL7P18124 248 aaKnown RBP3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SUPT4H1P63272 117 aaKnown RBP3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 HAMPP81172 84 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GAGE2BQ13066 116 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TAL2Q16559 108 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GAGE2EQ4V326 116 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MEIG1Q5JSS6 88 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 Q6AWC8 147 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 Q6ZUT4 128 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 Q6ZVH6 145 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 RNF182Q8N6D2 247 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM229BQ8NBD8 167 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 C18orf32Q8TCD1 76 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SCGB1C1Q8TD33 95 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM37Q8WXS4 190 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SLC25A39Q9BZJ4 359 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 NOP10Q9NPE3 64 aaKnown RBP3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GAGE2DQ9UEU5 116 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SPCS1Q9Y6A9 102 aa3.83□□□□□ -1.8
SMARCE1P3-201ENST00000553649 IGKV1D-37A0A075B6S9 117 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 A0A1W2PPM0 123 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CRXO43186 299 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SLC25A6P12236 298 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GALR1P47211 349 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LINC00315P59091 139 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GNG5P63218 68 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MPV17L2Q567V2 206 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 NMSQ5H8A3 153 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LELP1Q5T871 98 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SLC25A34Q6PIV7 304 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 AMTNQ6UX39 209 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 BORCS7Q96B45 105 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 ATP5SQ99766 215 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM222Q9H0R3 208 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 Q9H3A6 140 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SDF2L1Q9HCN8 221 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 PXMP4Q9Y6I8 212 aa3.82□□□□□ -1.8
SMARCE1P3-201ENST00000553649 A0A1B0GV50 99 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 PLAC8L1A1L4L8 177 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 DUSP14O95147 198 aaKnown RBP3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 PPP1R1AQ13522 171 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 ESRGQ1W209 222 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 C1orf195Q5TG92 126 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 RASL11AQ6T310 242 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LHFPL1Q86WI0 220 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 Q8N976 141 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 C16orf74Q96GX8 76 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 VGLL1Q99990 258 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 NAA60Q9H7X0 242 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MANBALQ9NQG1 85 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TIMM8BQ9Y5J9 83 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TRAPPC1Q9Y5R8 145 aa3.81□□□□□ -1.8
SMARCE1P3-201ENST00000553649 A0A087X0K7 114 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TRAV8-2A0A0B4J237 113 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TRAV1-1A0A0B4J248 108 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TRAV5A0A0B4J249 113 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MUC21A0A0G2JKD1 596 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MUC21A0A140T8X8 626 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GGTLC3B5MD39 225 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CCDC179H3BU77 68 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 ATP5LO75964 103 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 IAPPP10997 89 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GATA2P23769 480 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 KRTDAPP60985 99 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 PIK3CD-AS1Q5SR53 167 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MUC21Q5SSG8 566 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CD164L2Q6UWJ8 174 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GOLT1AQ6ZVE7 132 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CYB561D1Q8N8Q1 229 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM147Q9BVK8 224 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM191AQ9H0A3 160 aa3.8□□□□□ -1.8
SMARCE1P3-201ENST00000553649 hDV102S1A0JD36 115 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 A8MTW9 85 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 H3BMG7 143 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 PITX3O75364 302 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 NCR2O95944 276 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CXorf1O96002 111 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 OXTP01178 125 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LINC00694P0DN24 101 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CRISP2P16562 243 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 RPL7L1Q6DKI1 246 aaKnown RBP3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CYP2G1PQ6ZSU1 146 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LYZL2Q7Z4W2 148 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 BAGE3Q86Y29 109 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 BAGE2Q86Y30 109 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM256Q8N2U0 113 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 OR8A1Q8NGG7 326 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms