RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 CXCL1P09341 107 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 SMIM17P0DL12 118 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 SULT1A2P50226 295 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 DEFA3P59666 94 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 INO80EQ8NBZ0 244 aaPredicted RBP8.3□□□□□ -1.08
CCDC59-202ENST00000547758 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 ZNF726P1Q15940 193 aa8.29□□□□□ -1.08
CCDC59-202ENST00000547758 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
CCDC59-202ENST00000547758 CTXND1A0A1B0GTU2 59 aa8.28□□□□□ -1.08
CCDC59-202ENST00000547758 OR5AL1P0C617 328 aa8.28□□□□□ -1.08
CCDC59-202ENST00000547758 SSTP61278 116 aa8.28□□□□□ -1.08
CCDC59-202ENST00000547758 AP1S3Q96PC3 154 aa8.28□□□□□ -1.08
CCDC59-202ENST00000547758 M0QY20 66 aa8.27□□□□□ -1.09
CCDC59-202ENST00000547758 UBE2L6O14933 153 aa8.27□□□□□ -1.09
CCDC59-202ENST00000547758 PKIGQ9Y2B9 76 aa8.27□□□□□ -1.09
CCDC59-202ENST00000547758 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
CCDC59-202ENST00000547758 MGPP08493 103 aa8.26□□□□□ -1.09
CCDC59-202ENST00000547758 ZNF664Q8N3J9 261 aa8.26□□□□□ -1.09
CCDC59-202ENST00000547758 TCEAL7Q9BRU2 100 aa8.26□□□□□ -1.09
CCDC59-202ENST00000547758 AKR1C3P42330 323 aa8.25□□□□□ -1.09
CCDC59-202ENST00000547758 NKX2-5P52952 324 aaPredicted RBP8.25□□□□□ -1.09
CCDC59-202ENST00000547758 SUMO4Q6EEV6 95 aa8.25□□□□□ -1.09
CCDC59-202ENST00000547758 CHCHD10Q8WYQ3 142 aaPredicted RBP8.25□□□□□ -1.09
CCDC59-202ENST00000547758 PGLYRP4Q96LB8 373 aa8.25□□□□□ -1.09
CCDC59-202ENST00000547758 MARVELD1Q9BSK0 173 aa8.25□□□□□ -1.09
CCDC59-202ENST00000547758 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
CCDC59-202ENST00000547758 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
CCDC59-202ENST00000547758 STOML3Q8TAV4 291 aa8.24□□□□□ -1.09
CCDC59-202ENST00000547758 AMTP48728 403 aa8.23□□□□□ -1.09
CCDC59-202ENST00000547758 FHITP49789 147 aa8.23□□□□□ -1.09
CCDC59-202ENST00000547758 CACNG7P62955 275 aa8.23□□□□□ -1.09
CCDC59-202ENST00000547758 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
CCDC59-202ENST00000547758 UPK1BO75841 260 aa8.22□□□□□ -1.09
CCDC59-202ENST00000547758 COTL1Q14019 142 aa8.22□□□□□ -1.09
CCDC59-202ENST00000547758 RASL11AQ6T310 242 aa8.22□□□□□ -1.09
CCDC59-202ENST00000547758 CARD19Q96LW7 228 aa8.22□□□□□ -1.09
CCDC59-202ENST00000547758 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
CCDC59-202ENST00000547758 FOXI1Q12951 378 aa8.21□□□□□ -1.1
CCDC59-202ENST00000547758 RPL7L1Q6DKI1 246 aaKnown RBP8.21□□□□□ -1.1
CCDC59-202ENST00000547758 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
CCDC59-202ENST00000547758 S100ZQ8WXG8 99 aa8.21□□□□□ -1.1
CCDC59-202ENST00000547758 MLST8Q9BVC4 326 aa8.21□□□□□ -1.1
CCDC59-202ENST00000547758 MAP1LC3BQ9GZQ8 125 aa8.21□□□□□ -1.1
CCDC59-202ENST00000547758 S100A9P06702 114 aaKnown RBP8.2□□□□□ -1.1
CCDC59-202ENST00000547758 PTTG1IPP53801 180 aa8.2□□□□□ -1.1
CCDC59-202ENST00000547758 IFITM3Q01628 133 aa8.2□□□□□ -1.1
CCDC59-202ENST00000547758 AKR1C8PQ5T2L2 129 aa8.2□□□□□ -1.1
CCDC59-202ENST00000547758 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
CCDC59-202ENST00000547758 MED28Q9H204 178 aa8.2□□□□□ -1.1
CCDC59-202ENST00000547758 NIT2Q9NQR4 276 aa8.2□□□□□ -1.1
CCDC59-202ENST00000547758 BORCS7-ASMTA0A0B4J1R7 106 aa8.19□□□□□ -1.1
CCDC59-202ENST00000547758 MT-ND6P03923 174 aa8.19□□□□□ -1.1
CCDC59-202ENST00000547758 AMMECR1LQ6DCA0 310 aa8.19□□□□□ -1.1
CCDC59-202ENST00000547758 LINC00299Q6ZSB3 139 aa8.19□□□□□ -1.1
CCDC59-202ENST00000547758 BAGE2Q86Y30 109 aa8.19□□□□□ -1.1
CCDC59-202ENST00000547758 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
CCDC59-202ENST00000547758 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
CCDC59-202ENST00000547758 PRR4Q16378 134 aa8.18□□□□□ -1.1
CCDC59-202ENST00000547758 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 PAGE4O60829 102 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 XCL1P47992 114 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 GAGE2BQ13066 116 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 RNASEKQ6P5S7 137 aaKnown RBP8.17□□□□□ -1.1
CCDC59-202ENST00000547758 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
CCDC59-202ENST00000547758 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
CCDC59-202ENST00000547758 IGLC6P0CF74 106 aa8.16□□□□□ -1.1
CCDC59-202ENST00000547758 DIRC1Q969H9 104 aa8.16□□□□□ -1.1
CCDC59-202ENST00000547758 NDUFA13Q9P0J0 144 aa8.16□□□□□ -1.1
CCDC59-202ENST00000547758 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
CCDC59-202ENST00000547758 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
CCDC59-202ENST00000547758 ZNF561-AS1K7EIQ3 104 aa8.15□□□□□ -1.1
CCDC59-202ENST00000547758 H7C423 109 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 CCL25O15444 150 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 TRGC1P0CF51 173 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 FGF6P10767 208 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 NTF3P20783 257 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 Q6ZNX1 250 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 OR5A1Q8NGJ0 315 aa8.14□□□□□ -1.11
CCDC59-202ENST00000547758 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
CCDC59-202ENST00000547758 PFDN1O60925 122 aa8.13□□□□□ -1.11
CCDC59-202ENST00000547758 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
CCDC59-202ENST00000547758 CAMPP49913 170 aa8.13□□□□□ -1.11
CCDC59-202ENST00000547758 Q5BKY6 102 aa8.13□□□□□ -1.11
CCDC59-202ENST00000547758 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
CCDC59-202ENST00000547758 ISOC2Q96AB3 205 aa8.13□□□□□ -1.11
CCDC59-202ENST00000547758 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 H0Y9J4 135 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 NCR2O95944 276 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 APCSP02743 223 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 BCL2P10415 239 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 DEFA1P59665 94 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 RPS20P60866 119 aaKnown RBP8.12□□□□□ -1.11
CCDC59-202ENST00000547758 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
CCDC59-202ENST00000547758 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 ALG5Q9Y673 324 aa8.12□□□□□ -1.11
CCDC59-202ENST00000547758 F2Z2F3 143 aa8.11□□□□□ -1.11
CCDC59-202ENST00000547758 ZNF25P17030 456 aaPredicted RBP8.11□□□□□ -1.11
CCDC59-202ENST00000547758 TMUB2Q71RG4 321 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms