RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 C18orf65Q6ZTR6 163 aa9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 TMEM141Q96I45 108 aa9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 FASNP49327 2511 aaKnown RBP9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 FBN2P35556 2912 aa9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 TRBV27A0A0K0K1C4 114 aa9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 CRYGDP07320 174 aa9.04□□□□□ -0.96
LRTOMT-221ENST00000544409 POLQO75417 2590 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 A0A0J9YY99 117 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 IGIPA6NJ69 53 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 Q6Q795 121 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 PEMTQ9UBM1 199 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 M0QY20 66 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 DEFB131AP59861 70 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 PAPPA-AS1Q5QFB9 102 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 DEFB104AQ8WTQ1 72 aa9.03□□□□□ -0.96
LRTOMT-221ENST00000544409 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 TSHBP01222 138 aa9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 PMVKQ15126 192 aa9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 ZNF876PQ49A33 203 aa9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 TIMM17AQ99595 171 aa9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 ZNF256Q9Y2P7 627 aaPredicted RBP9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 CSMD2Q7Z408 3487 aa9.02□□□□□ -0.96
LRTOMT-221ENST00000544409 LOC107984640A0A0U1RRK4 108 aa9.02□□□□□ -0.97
LRTOMT-221ENST00000544409 RPL39P62891 51 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-221ENST00000544409 LINC00694P0DN24 101 aa9.02□□□□□ -0.97
LRTOMT-221ENST00000544409 KHDC1LQ5JSQ8 128 aa9.02□□□□□ -0.97
LRTOMT-221ENST00000544409 C4orf3Q8WVX3 66 aa9.02□□□□□ -0.97
LRTOMT-221ENST00000544409 IGHV3-30P01768 117 aa9.01□□□□□ -0.97
LRTOMT-221ENST00000544409 IGHV3-30-5P0DP03 117 aa9.01□□□□□ -0.97
LRTOMT-221ENST00000544409 LRRK2Q5S007 2527 aa9.01□□□□□ -0.97
LRTOMT-221ENST00000544409 RHOHQ15669 191 aa9.01□□□□□ -0.97
LRTOMT-221ENST00000544409 UBR5O95071 2799 aaPredicted RBP9□□□□□ -0.97
LRTOMT-221ENST00000544409 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 HERVK_113P61574 105 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
LRTOMT-221ENST00000544409 ZANQ9Y493 2812 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 C11orf86A6NJI1 115 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 A8MTW9 85 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 H3BMM0 161 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
LRTOMT-221ENST00000544409 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 RBMY1FQ15415 496 aaKnown RBP9□□□□□ -0.97
LRTOMT-221ENST00000544409 Q1RN00 199 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 NSUN5P1Q3KNT7 163 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 LINC01587Q99440 93 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 TMEM126AQ9H061 195 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 DYNLRB2Q8TF09 96 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 SORL1Q92673 2214 aa9□□□□□ -0.97
LRTOMT-221ENST00000544409 PTPN13Q12923 2485 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 A4D1N5 150 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 KRTAP1-3Q8IUG1 177 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 TMEM61Q8N0U2 210 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 DUX3Q96PT4 197 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 HTN1P15515 57 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 TMEM86BQ8N661 226 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 SPANXA1Q9NS26 97 aa8.99□□□□□ -0.97
LRTOMT-221ENST00000544409 MRPL23Q16540 153 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 I3L3M4 83 aa8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 LINC01620Q4KN68 170 aa8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 NAV2Q8IVL1 2488 aa8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 RBMY1BA6NDE4 496 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 RBMY1EA6NEQ0 496 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 RBMY1DP0C7P1 496 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-221ENST00000544409 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 SLC25A29Q8N8R3 303 aa8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 CREBBPQ92793 2442 aa8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 EIF4EBP3O60516 100 aaPredicted RBP8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 UBE2WQ96B02 151 aa8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 MAP6D1Q9H9H5 199 aa8.97□□□□□ -0.97
LRTOMT-221ENST00000544409 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.97
LRTOMT-221ENST00000544409 EDA2RQ9HAV5 297 aa8.96□□□□□ -0.97
LRTOMT-221ENST00000544409 ZNF415Q09FC8 603 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 C20orf203Q8NBC4 194 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 P0DMU3 169 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 FAM231AP0DMU4 169 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 FAM231CP0DMU5 169 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 DEFB114Q30KQ6 69 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 C5orf47Q569G3 176 aa8.96□□□□□ -0.98
LRTOMT-221ENST00000544409 CENPEQ02224 2701 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 M0R2P5 195 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 C2orf82Q6UX34 121 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 Q6ZSV7 163 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 KLK5Q9Y337 293 aaPredicted RBP8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 MXRA5Q9NR99 2828 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 IGHV3-73A0A0B4J1V6 119 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 ZNRF2Q8NHG8 242 aa8.95□□□□□ -0.98
LRTOMT-221ENST00000544409 ABCA12Q86UK0 2595 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 RPL13AP40429 203 aaKnown RBP8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 PIK3CD-AS1Q5SR53 167 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 CEMP1Q6PRD7 247 aaPredicted RBP8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 TMEM263Q8WUH6 116 aaKnown RBP8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms