RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PSMB2P49721 201 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 FHL3Q13643 280 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 SETXQ7Z333 2677 aaKnown RBP12.59□□□□□ -0.39
SPIDR-227ENST00000541342 TRBV6-5A0A0K0K1A5 114 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 SLC25A29Q8N8R3 303 aa12.59□□□□□ -0.39
SPIDR-227ENST00000541342 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
SPIDR-227ENST00000541342 M0QY20 66 aa12.58□□□□□ -0.4
SPIDR-227ENST00000541342 HERVK_113P61574 105 aa12.58□□□□□ -0.4
SPIDR-227ENST00000541342 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
SPIDR-227ENST00000541342 PTH2Q96A98 100 aa12.58□□□□□ -0.4
SPIDR-227ENST00000541342 EIF4EBP3O60516 100 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-227ENST00000541342 ODF3Q96PU9 254 aa12.57□□□□□ -0.4
SPIDR-227ENST00000541342 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-227ENST00000541342 CCL24O00175 119 aa12.57□□□□□ -0.4
SPIDR-227ENST00000541342 TCL1BO95988 128 aa12.57□□□□□ -0.4
SPIDR-227ENST00000541342 ATP6V0E2Q8NHE4 81 aa12.57□□□□□ -0.4
SPIDR-227ENST00000541342 CDIP1Q9H305 208 aa12.57□□□□□ -0.4
SPIDR-227ENST00000541342 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
SPIDR-227ENST00000541342 P0DMU3 169 aa12.56□□□□□ -0.4
SPIDR-227ENST00000541342 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
SPIDR-227ENST00000541342 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
SPIDR-227ENST00000541342 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
SPIDR-227ENST00000541342 Q8N1Y9 231 aa12.56□□□□□ -0.4
SPIDR-227ENST00000541342 J3QQQ9 107 aa12.55□□□□□ -0.4
SPIDR-227ENST00000541342 DYNLRB2Q8TF09 96 aa12.55□□□□□ -0.4
SPIDR-227ENST00000541342 CARD19Q96LW7 228 aa12.55□□□□□ -0.4
SPIDR-227ENST00000541342 KNCNA6PVL3 124 aa12.54□□□□□ -0.4
SPIDR-227ENST00000541342 DEFB131AP59861 70 aa12.54□□□□□ -0.4
SPIDR-227ENST00000541342 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
SPIDR-227ENST00000541342 NSD1Q96L73 2696 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-227ENST00000541342 NSUN5P1Q3KNT7 163 aa12.54□□□□□ -0.4
SPIDR-227ENST00000541342 SYT8Q8NBV8 401 aa12.54□□□□□ -0.4
SPIDR-227ENST00000541342 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
SPIDR-227ENST00000541342 TRAV2A0A0B4J234 112 aa12.53□□□□□ -0.4
SPIDR-227ENST00000541342 NDUFA7O95182 113 aa12.53□□□□□ -0.4
SPIDR-227ENST00000541342 ZNF56Q15929 161 aa12.53□□□□□ -0.4
SPIDR-227ENST00000541342 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
SPIDR-227ENST00000541342 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
SPIDR-227ENST00000541342 TMEM223A0PJW6 202 aa12.52□□□□□ -0.4
SPIDR-227ENST00000541342 PROK1P58294 105 aa12.52□□□□□ -0.41
SPIDR-227ENST00000541342 SBSPONQ8IVN8 264 aa12.52□□□□□ -0.41
SPIDR-227ENST00000541342 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
SPIDR-227ENST00000541342 CIDEAO60543 219 aa12.51□□□□□ -0.41
SPIDR-227ENST00000541342 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
SPIDR-227ENST00000541342 FAM104AQ969W3 186 aa12.5□□□□□ -0.41
SPIDR-227ENST00000541342 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
SPIDR-227ENST00000541342 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
SPIDR-227ENST00000541342 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
SPIDR-227ENST00000541342 ZNF22P17026 224 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-227ENST00000541342 RHOHQ15669 191 aa12.5□□□□□ -0.41
SPIDR-227ENST00000541342 C20orf203Q8NBC4 194 aa12.5□□□□□ -0.41
SPIDR-227ENST00000541342 PRO1854Q9UHT4 67 aa12.5□□□□□ -0.41
SPIDR-227ENST00000541342 H3BMM0 161 aa12.5□□□□□ -0.41
SPIDR-227ENST00000541342 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
SPIDR-227ENST00000541342 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
SPIDR-227ENST00000541342 IGHV3-64A0A075B6Q5 118 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 IGHV1OR15-1A0A075B7D0 117 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 A4D1N5 150 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 A8MTW9 85 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 LEPROTO15243 131 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 RBMY1A1P0DJD3 496 aaKnown RBP12.49□□□□□ -0.41
SPIDR-227ENST00000541342 RBMY1CP0DJD4 496 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 KRTAP10-3P60369 221 aa12.49□□□□□ -0.41
SPIDR-227ENST00000541342 RBMY1FQ15415 496 aaKnown RBP12.49□□□□□ -0.41
SPIDR-227ENST00000541342 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
SPIDR-227ENST00000541342 NACAE9PAV3 2078 aa12.48□□□□□ -0.41
SPIDR-227ENST00000541342 RHODO00212 210 aa12.48□□□□□ -0.41
SPIDR-227ENST00000541342 IGLV4-3A0A075B6K6 122 aa12.48□□□□□ -0.41
SPIDR-227ENST00000541342 TRBV20-1A0A075B6N2 111 aa12.48□□□□□ -0.41
SPIDR-227ENST00000541342 A0A0J9YXV3 536 aa12.47□□□□□ -0.41
SPIDR-227ENST00000541342 TMEM263Q8WUH6 116 aaKnown RBP12.47□□□□□ -0.41
SPIDR-227ENST00000541342 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
SPIDR-227ENST00000541342 MT-ATP8P03928 68 aa12.47□□□□□ -0.41
SPIDR-227ENST00000541342 LYRM7Q5U5X0 104 aa12.47□□□□□ -0.41
SPIDR-227ENST00000541342 XGP55808 180 aa12.47□□□□□ -0.41
SPIDR-227ENST00000541342 PPDPFLQ8WWR9 84 aa12.47□□□□□ -0.41
SPIDR-227ENST00000541342 IGHV3-33P01772 117 aa12.46□□□□□ -0.42
SPIDR-227ENST00000541342 I3L3M4 83 aa12.45□□□□□ -0.42
SPIDR-227ENST00000541342 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
SPIDR-227ENST00000541342 ANKRD29Q8N6D5 301 aa12.45□□□□□ -0.42
SPIDR-227ENST00000541342 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
SPIDR-227ENST00000541342 Q6ZUT4 128 aa12.45□□□□□ -0.42
SPIDR-227ENST00000541342 MUSTN1Q8IVN3 82 aa12.45□□□□□ -0.42
SPIDR-227ENST00000541342 Q9UF83 564 aa12.44□□□□□ -0.42
SPIDR-227ENST00000541342 A0A1B0GV72 72 aa12.44□□□□□ -0.42
SPIDR-227ENST00000541342 A8MWV9 139 aa12.44□□□□□ -0.42
SPIDR-227ENST00000541342 CRYBA4P53673 196 aa12.44□□□□□ -0.42
SPIDR-227ENST00000541342 LITAFQ99732 161 aa12.43□□□□□ -0.42
SPIDR-227ENST00000541342 M0R2P5 195 aa12.42□□□□□ -0.42
SPIDR-227ENST00000541342 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
SPIDR-227ENST00000541342 SCGB1C2P0DMR2 95 aa12.42□□□□□ -0.42
SPIDR-227ENST00000541342 CEMP1Q6PRD7 247 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-227ENST00000541342 A0A0B4J2C4 111 aa12.42□□□□□ -0.42
SPIDR-227ENST00000541342 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
SPIDR-227ENST00000541342 PRM2P04554 102 aa12.42□□□□□ -0.42
SPIDR-227ENST00000541342 CKS1BP61024 79 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms