RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TSLPQ969D9 159 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 PPP3R2Q96LZ3 170 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 R4GMQ9 66 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 MYH6P13533 1939 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 CADP27708 2225 aa0.11□□□□□ -2.39
CCDC7-209ENST00000539197 UNC13BO14795 1591 aa0.11□□□□□ -2.39
CCDC7-209ENST00000539197 CTXND1A0A1B0GTU2 59 aa0.11□□□□□ -2.39
CCDC7-209ENST00000539197 APOC2P02655 101 aa0.11□□□□□ -2.39
CCDC7-209ENST00000539197 SCN3BQ9NY72 215 aa0.11□□□□□ -2.39
CCDC7-209ENST00000539197 PLXNA1Q9UIW2 1896 aa0.11□□□□□ -2.39
CCDC7-209ENST00000539197 OTOGQ6ZRI0 2925 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 MRC1P22897 1456 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 EFCAB10A6NFE3 127 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 OOSP1A8MZH6 123 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 PIN1P1O15428 100 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 PP6455Q8WZ26 134 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 SPANXDQ9BXN6 97 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 LINC00474Q9P2X8 69 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 LENEPQ9Y5L5 61 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 V9GYH0 126 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 DOCK11Q5JSL3 2073 aa0.1□□□□□ -2.39
CCDC7-209ENST00000539197 F8P00451 2351 aa0.09□□□□□ -2.39
CCDC7-209ENST00000539197 DLEU1O43261 78 aa0.09□□□□□ -2.4
CCDC7-209ENST00000539197 SPINK8P0C7L1 97 aa0.09□□□□□ -2.4
CCDC7-209ENST00000539197 SARNPP82979 210 aaKnown RBP0.09□□□□□ -2.4
CCDC7-209ENST00000539197 NDUFA4L2Q9NRX3 87 aa0.09□□□□□ -2.4
CCDC7-209ENST00000539197 NAIPQ13075 1403 aa0.09□□□□□ -2.4
CCDC7-209ENST00000539197 PPIP5K1Q6PFW1 1433 aa0.09□□□□□ -2.4
CCDC7-209ENST00000539197 CPSF1Q10570 1443 aaKnown RBP0.08□□□□□ -2.4
CCDC7-209ENST00000539197 TRBV7-3A0A075B6L6 115 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 A0A0D9SFI3 127 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 BCE1O60756 84 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 SNAPC5O75971 98 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 IFNGP01579 166 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 HAMPP81172 84 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 MRPL54Q6P161 138 aaKnown RBP0.08□□□□□ -2.4
CCDC7-209ENST00000539197 COMMD6Q7Z4G1 85 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 C5orf38Q86SI9 138 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 C8orf59Q8N0T1 100 aaPredicted RBP0.08□□□□□ -2.4
CCDC7-209ENST00000539197 SMIM4Q8WVI0 70 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 AMELXQ99217 191 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 CYP4F30PQ9H0H9 118 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 PRO0255Q9UI72 69 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 LRRC37A3O60309 1634 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 PXDNQ92626 1479 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 ARFGEF1Q9Y6D6 1849 aa0.08□□□□□ -2.4
CCDC7-209ENST00000539197 CELSR2Q9HCU4 2923 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 ARAP2Q8WZ64 1704 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 ZNF609O15014 1411 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 F8VRH5 84 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 SSSCA1O60232 199 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 C9orf153Q5TBE3 101 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 MGST2Q99735 147 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 U3KQA8 63 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 PHLPP1O60346 1717 aa0.07□□□□□ -2.4
CCDC7-209ENST00000539197 IGLC7A0M8Q6 106 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 HMGN4O00479 90 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 IFITM1P13164 125 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 TMEM170BQ5T4T1 132 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 CNFNQ9BYD5 112 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 LINC00472Q9H8W2 130 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 DYNLRB1Q9NP97 96 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 IFT172Q9UG01 1749 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 IGF2RP11717 2491 aa0.06□□□□□ -2.4
CCDC7-209ENST00000539197 A2ML1A8K2U0 1454 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 ASXL3Q9C0F0 2248 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 SIPA1L3O60292 1781 aaPredicted RBP0.05□□□□□ -2.4
CCDC7-209ENST00000539197 LINC00587B1AMM8 73 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 CFDP00746 253 aaPredicted RBP0.05□□□□□ -2.4
CCDC7-209ENST00000539197 TNFP01375 233 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 TPPP2P59282 170 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 BAGE2Q86Y30 109 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 DPH3P1Q9H4G8 78 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 PTPRZ1P23471 2315 aaPredicted RBP0.05□□□□□ -2.4
CCDC7-209ENST00000539197 SPEF2Q9C093 1822 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 CHD9Q3L8U1 2897 aa0.05□□□□□ -2.4
CCDC7-209ENST00000539197 KTN1Q86UP2 1357 aaKnown RBP0.05□□□□□ -2.4
CCDC7-209ENST00000539197 UNC79Q9P2D8 2635 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 PARP14Q460N5 1801 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 TRAV22A0A0B4J277 110 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 F6UZH7 168 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 CHKB-CPT1BH3BT56 60 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 M0R3E3 92 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 CORTO00230 105 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 UQCR11O14957 56 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 COX17Q14061 63 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 Q6JHZ5 121 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 C2orf88Q9BSF0 95 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 LINC01558Q9Y6Z2 57 aa0.04□□□□□ -2.4
CCDC7-209ENST00000539197 HRNRQ86YZ3 2850 aaPredicted RBP0.04□□□□□ -2.4
CCDC7-209ENST00000539197 FOCADQ5VW36 1801 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 CELSR1Q9NYQ6 3014 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 NCOR2Q9Y618 2525 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 UBE2L5PA0A1B0GUS4 154 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 FAM24AA6NFZ4 105 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 S100A1P23297 94 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 UBE2L3P68036 154 aaKnown RBP0.03□□□□□ -2.4
CCDC7-209ENST00000539197 MYOZ3Q8TDC0 251 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 IER3IP1Q9Y5U9 82 aa0.03□□□□□ -2.4
CCDC7-209ENST00000539197 SPCS1Q9Y6A9 102 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms