RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
CLIP1-208ENST00000537004 CFAP161Q6P656 301 aa8.58□□□□□ -1.04
CLIP1-208ENST00000537004 C11orf72Q8NBR9 251 aa8.58□□□□□ -1.04
CLIP1-208ENST00000537004 M0QY20 66 aa8.57□□□□□ -1.04
CLIP1-208ENST00000537004 M0R2P5 195 aa8.57□□□□□ -1.04
CLIP1-208ENST00000537004 PRSS1P07477 247 aa8.57□□□□□ -1.04
CLIP1-208ENST00000537004 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
CLIP1-208ENST00000537004 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
CLIP1-208ENST00000537004 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
CLIP1-208ENST00000537004 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 ODF1Q14990 250 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 PIK3CD-AS1Q5SR53 167 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-208ENST00000537004 C1orf158Q8N1D5 194 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
CLIP1-208ENST00000537004 VCYO14598 125 aa8.55□□□□□ -1.04
CLIP1-208ENST00000537004 PTH2Q96A98 100 aa8.55□□□□□ -1.04
CLIP1-208ENST00000537004 RNF183Q96D59 192 aa8.55□□□□□ -1.04
CLIP1-208ENST00000537004 SPXQ9BT56 116 aa8.55□□□□□ -1.04
CLIP1-208ENST00000537004 IGHV3OR16-12A0A075B7B8 117 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 A0A0J9YWU9 116 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 TRBV27A0A0K0K1C4 114 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 A8MWV9 139 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-208ENST00000537004 C2orf66Q6UXQ4 117 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 KIR2DL4Q99706 377 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 RYR2Q92736 4967 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-208ENST00000537004 AZU1P20160 251 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 ERASQ7Z444 233 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
CLIP1-208ENST00000537004 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 SEC11AP67812 179 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 UFSP1Q6NVU6 142 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 ZFP2Q6ZN57 461 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
CLIP1-208ENST00000537004 TP53TG1Q9Y2A0 90 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 TRAV8-6A0A0B4J262 113 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 H7C1H1 209 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 GTF2H5Q6ZYL4 71 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 DEFB104AQ8WTQ1 72 aa8.53□□□□□ -1.04
CLIP1-208ENST00000537004 DYNC2H1Q8NCM8 4307 aaKnown RBP8.52□□□□□ -1.04
CLIP1-208ENST00000537004 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.05
CLIP1-208ENST00000537004 A0A087WX48 190 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 DEFB4AO15263 64 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 DPM2O94777 84 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 IGKCP01834 107 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 COX8AP10176 69 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 IL17DQ8TAD2 202 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 MRPL35Q9NZE8 188 aaKnown RBP8.51□□□□□ -1.05
CLIP1-208ENST00000537004 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
CLIP1-208ENST00000537004 TRAV12-1A0A0B4J245 112 aa8.5□□□□□ -1.05
CLIP1-208ENST00000537004 RHODO00212 210 aa8.5□□□□□ -1.05
CLIP1-208ENST00000537004 TCTAP57738 103 aa8.5□□□□□ -1.05
CLIP1-208ENST00000537004 NEXN-AS1Q8NBZ9 246 aa8.5□□□□□ -1.05
CLIP1-208ENST00000537004 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
CLIP1-208ENST00000537004 C1QTNF4Q9BXJ3 329 aa8.5□□□□□ -1.05
CLIP1-208ENST00000537004 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
CLIP1-208ENST00000537004 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 RS1O15537 224 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 P0DMU3 169 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
CLIP1-208ENST00000537004 C9orf118A6NHY6 69 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 H3BRM9 83 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 I3L3M4 83 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 TSHBP01222 138 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 RHOHQ15669 191 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 Q6ZSN1 163 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 BAALCQ8WXS3 180 aa8.49□□□□□ -1.05
CLIP1-208ENST00000537004 TRGV1A0A0A0MS02 117 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 A6NDN8 102 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 F8VRH5 84 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 FGF6P10767 208 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 PLNP26678 52 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 TMEM97Q5BJF2 176 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
CLIP1-208ENST00000537004 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 TNFRSF18Q9Y5U5 241 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 K7EP34 96 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 NMUP48645 174 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 ZC2HC1BQ5TFG8 222 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 Q9UF83 564 aa8.47□□□□□ -1.05
CLIP1-208ENST00000537004 Q6ZTI0 123 aa8.46□□□□□ -1.05
CLIP1-208ENST00000537004 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.05
CLIP1-208ENST00000537004 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.05
CLIP1-208ENST00000537004 C16orf74Q96GX8 76 aa8.46□□□□□ -1.05
CLIP1-208ENST00000537004 TMEM141Q96I45 108 aa8.46□□□□□ -1.05
CLIP1-208ENST00000537004 TIMM17AQ99595 171 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms