RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 WDR83OSQ9Y284 106 aa2.07□□□□□ -2.08
YBX3-205ENST00000536107 KCNIP3Q9Y2W7 256 aa2.07□□□□□ -2.08
YBX3-205ENST00000536107 LSM2Q9Y333 95 aaKnown RBP2.07□□□□□ -2.08
YBX3-205ENST00000536107 TRBV6-1A0A0K0K1D8 114 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 NUPR1O60356 82 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 ATP6V1G1O75348 118 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 TAS2R19P59542 299 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 RANP62826 216 aaKnown RBP2.06□□□□□ -2.08
YBX3-205ENST00000536107 MLLT11Q13015 90 aaPredicted RBP2.06□□□□□ -2.08
YBX3-205ENST00000536107 ZNF56Q15929 161 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 IQCJQ1A5X6 159 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 KIAA1644Q3SXP7 199 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 RNASE10Q5GAN6 216 aaKnown RBP2.06□□□□□ -2.08
YBX3-205ENST00000536107 TMEM252Q8N6L7 170 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 CMTM2Q8TAZ6 248 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 DYNC2LI1Q8TCX1 351 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 SGK494Q96LW2 274 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 PFDN5Q99471 154 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 NDFIP1Q9BT67 221 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 TMEM243Q9BU79 118 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 SLIRPQ9GZT3 109 aaKnown RBP2.06□□□□□ -2.08
YBX3-205ENST00000536107 TMEM14CQ9P0S9 112 aa2.06□□□□□ -2.08
YBX3-205ENST00000536107 A0A0B4J2A0 478 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 A0A0U1RRA0 63 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 XKRY2A2RUG3 117 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 C19orf71A6NCJ1 209 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 H3BVH4 76 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 M0R036 132 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 M0R381 172 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 SYNGR2O43760 224 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 GCGP01275 180 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 MT1FP04733 61 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 NBEAP1P0C6P0 100 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 MXD1Q05195 221 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 LINC00242Q5T6M2 205 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 MIC13Q5XKP0 118 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 AMMECR1LQ6DCA0 310 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 C8orf59Q8N0T1 100 aaPredicted RBP2.05□□□□□ -2.08
YBX3-205ENST00000536107 NUP35Q8NFH5 326 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 OR2D3Q8NGH3 330 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 SCN3BQ9NY72 215 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 SHPKQ9UHJ6 478 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 FLVCR2Q9UPI3 526 aa2.05□□□□□ -2.08
YBX3-205ENST00000536107 TRDV1A0A1B0GX56 115 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 C9orf92A6NGG3 77 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 FAM25EA8MYX2 175 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 H0Y8G0 127 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 CCL25O15444 150 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 BCE1O60756 84 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 CIB2O75838 187 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 METTL15P1P0C7V9 234 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 UBE2AP49459 152 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 RAB4BP61018 213 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 RNASEKQ6P5S7 137 aaKnown RBP2.04□□□□□ -2.08
YBX3-205ENST00000536107 GOLT1AQ6ZVE7 132 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 SNX29P2Q8IUI4 249 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 CLVS1Q8IUQ0 354 aaPredicted RBP2.04□□□□□ -2.08
YBX3-205ENST00000536107 FAM19A2Q8N3H0 131 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 C3orf22Q8N5N4 141 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 SFRP2Q96HF1 295 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 IMMP2LQ96T52 175 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 MGST2Q99735 147 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 RTBDNQ9BSG5 229 aaPredicted RBP2.04□□□□□ -2.08
YBX3-205ENST00000536107 LYRM2Q9NU23 88 aaPredicted RBP2.04□□□□□ -2.08
YBX3-205ENST00000536107 PSENENQ9NZ42 101 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
YBX3-205ENST00000536107 SMIM31A0A1B0GVY4 71 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 K7EQM0 130 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 L7N2F9 121 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 BCL2L11O43521 198 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 CD3DP04234 171 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 ARMS2P0C7Q2 107 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 ANXA3P12429 323 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 ZNF80P51504 273 aaPredicted RBP2.03□□□□□ -2.08
YBX3-205ENST00000536107 RPS20P60866 119 aaKnown RBP2.03□□□□□ -2.08
YBX3-205ENST00000536107 IAH1Q2TAA2 248 aaPredicted RBP2.03□□□□□ -2.08
YBX3-205ENST00000536107 PHYHIPLQ96FC7 376 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 PGLYRP4Q96LB8 373 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 ALKBH7Q9BT30 221 aaPredicted RBP2.03□□□□□ -2.08
YBX3-205ENST00000536107 UQCC1Q9NVA1 299 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 NDUFB11Q9NX14 153 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 IL36BQ9NZH7 164 aa2.03□□□□□ -2.08
YBX3-205ENST00000536107 PIGBOS1A0A0B4J2F0 54 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 GRIFINA4D1Z8 144 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 FNDC10F2Z333 226 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 H3BMQ9 156 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 SSSCA1O60232 199 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 SPINK1P00995 79 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 ESDP10768 282 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 TPT1P13693 172 aaKnown RBP2.02□□□□□ -2.09
YBX3-205ENST00000536107 SPRR2EP22531 72 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 SDC2P34741 201 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 SPRR2BP35325 72 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 SPRR2AP35326 72 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 SMUG1Q53HV7 270 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 UBE2NLQ5JXB2 153 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 FAM74A1Q5RGS3 127 aa2.02□□□□□ -2.09
YBX3-205ENST00000536107 Q6ZVH6 145 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms