RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 H3BMQ9 156 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 SH2D1AO60880 128 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 TMBIM6P55061 237 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 SYCNQ0VAF6 134 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 FOXI1Q12951 378 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 TPRXLQ17RH7 258 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 ARL14EPLP0DKL9 152 aa4.85□□□□□ -1.63
CLIP1-206ENST00000535290 BCL2P10415 239 aa4.85□□□□□ -1.63
CLIP1-206ENST00000535290 BTCP35070 178 aa4.85□□□□□ -1.63
CLIP1-206ENST00000535290 DEFA3P59666 94 aa4.85□□□□□ -1.63
CLIP1-206ENST00000535290 ZNF674Q2M3X9 581 aa4.85□□□□□ -1.63
CLIP1-206ENST00000535290 OR10AG1Q8NH19 301 aa4.85□□□□□ -1.63
CLIP1-206ENST00000535290 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
CLIP1-206ENST00000535290 LOC107984640A0A0U1RRK4 108 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 MUC21A0A140T8X8 626 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 A0A1W2PPV4 95 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 NAP1L6A6NFF2 107 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 CRYGAP11844 174 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 RPL12P30050 165 aaKnown RBP4.84□□□□□ -1.63
CLIP1-206ENST00000535290 SEC22CQ9BRL7 303 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 MLST8Q9BVC4 326 aa4.84□□□□□ -1.63
CLIP1-206ENST00000535290 RPP21Q9H633 154 aaKnown RBP4.84□□□□□ -1.63
CLIP1-206ENST00000535290 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
CLIP1-206ENST00000535290 FAM162BQ5T6X4 162 aa4.83□□□□□ -1.64
CLIP1-206ENST00000535290 ZNF471Q9BX82 626 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-206ENST00000535290 RBM38Q9H0Z9 239 aaKnown RBP4.83□□□□□ -1.64
CLIP1-206ENST00000535290 IGHV1-58A0A0C4DH39 117 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 H0YIZ8 118 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 M0QY20 66 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 PRYO14603 147 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 UBE2L6O14933 153 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 FGF6P10767 208 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 GCHFRP30047 84 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 XCL1P47992 114 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 NKX2-5P52952 324 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-206ENST00000535290 SSTP61278 116 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 Q86TA4 180 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 FAM210AQ96ND0 272 aa4.82□□□□□ -1.64
CLIP1-206ENST00000535290 A0A087X002 238 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-206ENST00000535290 NOL3O60936 208 aaKnown RBP4.81□□□□□ -1.64
CLIP1-206ENST00000535290 NPSP0C0P6 89 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 STAG3L2P0CL84 134 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 STAG3L3P0CL85 134 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 CAMPP49913 170 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 MEF2BQ02080 365 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-206ENST00000535290 COX8CQ7Z4L0 72 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 SCGB1C1Q8TD33 95 aa4.81□□□□□ -1.64
CLIP1-206ENST00000535290 IGLV4-69A0A075B6H9 119 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 PAGE4O60829 102 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 APOMO95445 188 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 RPL18AQ02543 176 aaKnown RBP4.8□□□□□ -1.64
CLIP1-206ENST00000535290 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 NUP35Q8NFH5 326 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 SMIM3Q9BZL3 60 aa4.8□□□□□ -1.64
CLIP1-206ENST00000535290 PEX7O00628 323 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 CCL25O15444 150 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 CDC34P49427 236 aaPredicted RBP4.79□□□□□ -1.64
CLIP1-206ENST00000535290 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 LRRC37A5PQ49AS3 106 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 SPANXN1Q5VSR9 72 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 TRIQKQ629K1 86 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 SUMO4Q6EEV6 95 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 OR5A1Q8NGJ0 315 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 PGLYRP4Q96LB8 373 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 OPRPNQ99935 248 aaPredicted RBP4.79□□□□□ -1.64
CLIP1-206ENST00000535290 WFDC1Q9HC57 220 aa4.79□□□□□ -1.64
CLIP1-206ENST00000535290 SNAI2O43623 268 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 SIX6O95475 246 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 MGPP08493 103 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 MT1HP80294 61 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 AMMECR1LQ6DCA0 310 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 PET117Q6UWS5 81 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 ISOC2Q96AB3 205 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 MED28Q9H204 178 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 ZFP30Q9Y2G7 519 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 HSPB11Q9Y547 144 aa4.78□□□□□ -1.64
CLIP1-206ENST00000535290 LINC00959A0A1B0GUT2 108 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 A0A1W2PRE2 83 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 CENPXA8MT69 81 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 OR5AL1P0C617 328 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 COTL1Q14019 142 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 CNPY1Q3B7I2 92 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 EIF5AL1Q6IS14 154 aaKnown RBP4.77□□□□□ -1.65
CLIP1-206ENST00000535290 RNASEKQ6P5S7 137 aaKnown RBP4.77□□□□□ -1.65
CLIP1-206ENST00000535290 LINC00173Q6ZV60 143 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 KRTAP7-1Q8IUC3 87 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 TSKUQ8WUA8 353 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 AP1S3Q96PC3 154 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 CAMK2N2Q96S95 79 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 PPDPFQ9H3Y8 114 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 TMEM167BQ9NRX6 74 aa4.77□□□□□ -1.65
CLIP1-206ENST00000535290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-206ENST00000535290 IGKV2-29A2NJV5 120 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-206ENST00000535290 ZNF861PO60384 105 aa4.76□□□□□ -1.65
CLIP1-206ENST00000535290 S100A5P33763 92 aa4.76□□□□□ -1.65
CLIP1-206ENST00000535290 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms