RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 P0DMU3 169 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 FAM231AP0DMU4 169 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 FAM231CP0DMU5 169 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 PYY3Q5JQD4 70 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 FAM222AQ5U5X8 452 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 A0A096LNJ9 63 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 BTF3P20290 206 aaKnown RBP8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 SPATA12Q7Z6I5 190 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 TNFRSF18Q9Y5U5 241 aa8.63□□□□□ -1.03
CHRDL2-209ENST00000534276 GAGE12BA1L429 117 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 I3L3M4 83 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 GAGE7O76087 117 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 GAGE12FP0CL80 117 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 GAGE12GP0CL81 117 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 GAGE12IP0CL82 117 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 RHOHQ15669 191 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 ZNF479Q96JC4 524 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
CHRDL2-209ENST00000534276 ATP5LO75964 103 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 PET117Q6UWS5 81 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 Q6ZSN1 163 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 C12orf57Q99622 126 aa8.61□□□□□ -1.03
CHRDL2-209ENST00000534276 IGHV3-73A0A0B4J1V6 119 aa8.6□□□□□ -1.03
CHRDL2-209ENST00000534276 K7EQD1 137 aa8.6□□□□□ -1.03
CHRDL2-209ENST00000534276 HTN3P15516 51 aa8.6□□□□□ -1.03
CHRDL2-209ENST00000534276 KRTDAPP60985 99 aa8.6□□□□□ -1.03
CHRDL2-209ENST00000534276 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
CHRDL2-209ENST00000534276 KRTAP17-1Q9BYP8 105 aa8.6□□□□□ -1.03
CHRDL2-209ENST00000534276 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 TRBV7-3A0A075B6L6 115 aa8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 M0R2N4 97 aa8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 NUDT3O95989 172 aa8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 FHL2Q14192 279 aa8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
CHRDL2-209ENST00000534276 HERC2O95714 4834 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 C20orf202A1L168 122 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 RTL8CO15255 209 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 SCGB1D1O95968 90 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 DAD1P61803 113 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 DAZ4Q86SG3 579 aaKnown RBP8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 UBE2DNLQ8IWF7 75 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 SLC25A29Q8N8R3 303 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 DAZ3Q9NR90 486 aaKnown RBP8.58□□□□□ -1.04
CHRDL2-209ENST00000534276 PRADC1Q9BSG0 188 aa8.57□□□□□ -1.04
CHRDL2-209ENST00000534276 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
CHRDL2-209ENST00000534276 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
CHRDL2-209ENST00000534276 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 TSHBP01222 138 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 NPSP0C0P6 89 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 S100A12P80511 92 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 Q6ZR54 194 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 ERASQ7Z444 233 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 Q8N976 141 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 PRO0255Q9UI72 69 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
CHRDL2-209ENST00000534276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 UBE2D3P61077 147 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 UBE2D2P62837 147 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 TMEM97Q5BJF2 176 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 LINC01545Q5VT33 79 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 LINC00173Q6ZV60 143 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 HHLA3Q9XRX5 114 aa8.55□□□□□ -1.04
CHRDL2-209ENST00000534276 ATP5G1P05496 136 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 COTL1Q14019 142 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 CRYBA4P53673 196 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 C15orf53Q8NAA6 179 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 PYGO1Q9Y3Y4 419 aa8.54□□□□□ -1.04
CHRDL2-209ENST00000534276 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 PAPPA-AS1Q5QFB9 102 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 Q9UF83 564 aa8.53□□□□□ -1.04
CHRDL2-209ENST00000534276 F5H768 121 aa8.52□□□□□ -1.05
CHRDL2-209ENST00000534276 PRSS1P07477 247 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms