RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PRADC1Q9BSG0 188 aa7.79□□□□□ -1.16
CCDC90B-218ENST00000533761 C11orf68Q9H3H3 251 aaKnown RBP7.79□□□□□ -1.16
CCDC90B-218ENST00000533761 DKK2Q9UBU2 259 aa7.79□□□□□ -1.16
CCDC90B-218ENST00000533761 TRBV6-4A0A1B0GX49 114 aa7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 H0Y8G0 127 aa7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 K7EQD1 137 aa7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 FABP4P15090 132 aa7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 RPL36AP83881 106 aaKnown RBP7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 RHOHQ15669 191 aa7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 RPL36ALQ969Q0 106 aaKnown RBP7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 HSPB8Q9UJY1 196 aa7.78□□□□□ -1.16
CCDC90B-218ENST00000533761 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 SDHAF1A6NFY7 115 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 FCER1GP30273 86 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 AKR1D1P51857 326 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 LAGE3Q14657 143 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 RPL39LQ96EH5 51 aaKnown RBP7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 ZNF479Q96JC4 524 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 HIST1H2BLQ99880 126 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
CCDC90B-218ENST00000533761 LINC01546A6NGU7 62 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 I3L3M4 83 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 HBDP02042 147 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 ATP5G1P05496 136 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 SMIM6P0DI80 62 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 PRKDCP78527 4128 aaKnown RBP7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 TGP01266 2768 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 TRBV7-3A0A075B6L6 115 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 IGHV1-24A0A0C4DH33 117 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 LEPROTL1O95214 131 aa7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 DAZ4Q86SG3 579 aaKnown RBP7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 DAZ3Q9NR90 486 aaKnown RBP7.76□□□□□ -1.17
CCDC90B-218ENST00000533761 GAS8-AS1O95177 125 aa7.75□□□□□ -1.17
CCDC90B-218ENST00000533761 NUDT3O95989 172 aa7.75□□□□□ -1.17
CCDC90B-218ENST00000533761 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
CCDC90B-218ENST00000533761 PRO0255Q9UI72 69 aa7.75□□□□□ -1.17
CCDC90B-218ENST00000533761 HHLA3Q9XRX5 114 aa7.75□□□□□ -1.17
CCDC90B-218ENST00000533761 A0A0J9YWU9 116 aa7.74□□□□□ -1.17
CCDC90B-218ENST00000533761 DEFB4AO15263 64 aa7.74□□□□□ -1.17
CCDC90B-218ENST00000533761 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
CCDC90B-218ENST00000533761 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 IGLV2-18A0A075B6J9 118 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 NUPR1O60356 82 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 SMAGPQ0VAQ4 97 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 TMEM97Q5BJF2 176 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 FAM19A2Q8N3H0 131 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 NEXN-AS1Q8NBZ9 246 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 URB1-AS1Q96HZ7 61 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 MAP1LC3CQ9BXW4 147 aa7.73□□□□□ -1.17
CCDC90B-218ENST00000533761 C20orf202A1L168 122 aa7.72□□□□□ -1.17
CCDC90B-218ENST00000533761 ATP5LO75964 103 aa7.72□□□□□ -1.17
CCDC90B-218ENST00000533761 FHL2Q14192 279 aa7.72□□□□□ -1.17
CCDC90B-218ENST00000533761 SH2D6Q7Z4S9 175 aa7.72□□□□□ -1.17
CCDC90B-218ENST00000533761 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
CCDC90B-218ENST00000533761 NACAE9PAV3 2078 aa7.71□□□□□ -1.17
CCDC90B-218ENST00000533761 IFITM10A6NMD0 228 aa7.71□□□□□ -1.17
CCDC90B-218ENST00000533761 ZNRF2Q8NHG8 242 aa7.71□□□□□ -1.17
CCDC90B-218ENST00000533761 PMCHL1Q16048 86 aa7.71□□□□□ -1.18
CCDC90B-218ENST00000533761 Q6ZSN1 163 aa7.71□□□□□ -1.18
CCDC90B-218ENST00000533761 C11orf45Q8TAV5 145 aa7.71□□□□□ -1.18
CCDC90B-218ENST00000533761 GAGE12JA6NER3 117 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 F5H768 121 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 P0DMU3 169 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 FAM231AP0DMU4 169 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 FAM231CP0DMU5 169 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 CRYBA4P53673 196 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 KRTDAPP60985 99 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 GAGE1Q13065 139 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 GAGE4Q13068 117 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 GAGE5Q13069 117 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 CELA1Q9UNI1 258 aa7.7□□□□□ -1.18
CCDC90B-218ENST00000533761 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 UBE2D3P61077 147 aa7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 UBE2D2P62837 147 aa7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 C2orf66Q6UXQ4 117 aa7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 TOMM6Q96B49 74 aa7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 GTSF1LQ9H1H1 148 aa7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
CCDC90B-218ENST00000533761 H3BNG1 76 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 TSHBP01222 138 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 GYPEP15421 78 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 Q6ZN92 141 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 NEGR1Q7Z3B1 354 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 SCGB3A1Q96QR1 104 aa7.68□□□□□ -1.18
CCDC90B-218ENST00000533761 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 TRAV26-1A0A087WT03 109 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 SCGB1D1O95968 90 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 NPSP0C0P6 89 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 HTN3P15516 51 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 JOSD1Q15040 202 aaPredicted RBP7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 MRPL23Q16540 153 aaKnown RBP7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 C12orf74Q32Q52 190 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
CCDC90B-218ENST00000533761 ERASQ7Z444 233 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms