RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 RNASE7Q9H1E1 156 aaKnown RBP4.76□□□□□ -1.65
TRIM53CP-201ENST00000531490 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
TRIM53CP-201ENST00000531490 MUC21A0A0G2JKD1 596 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 MUC21A0A140T8X8 626 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 A0A1B0GW15 77 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 C19orf71A6NCJ1 209 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 H3BVH4 76 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 SMR3BP02814 79 aaPredicted RBP4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 S100A8P05109 93 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 TRGC1P0CF51 173 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 GATA1P15976 413 aaPredicted RBP4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 ASIPP42127 132 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 SNRPEP62304 92 aaKnown RBP4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 MRPL23Q16540 153 aaKnown RBP4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 DNLZQ5SXM8 178 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 PTH2Q96A98 100 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 MRPS16Q9Y3D3 137 aaKnown RBP4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 ICOSQ9Y6W8 199 aa4.75□□□□□ -1.65
TRIM53CP-201ENST00000531490 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 KRTAP29-1A8MX34 341 aaPredicted RBP4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 PRYO14603 147 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BKO60814 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BJP06899 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BOP23527 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BBP33778 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 FOXA3P55318 350 aaPredicted RBP4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 NDUFA6P56556 154 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BDP58876 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 SSTP61278 116 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BCP62807 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HAMPP81172 84 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 FABP9Q0Z7S8 132 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 TWIST1Q15672 202 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST2H2BEQ16778 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 UFSP1Q6NVU6 142 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 NEGR1Q7Z3B1 354 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 FRZBQ92765 325 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BHQ93079 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BNQ99877 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIST1H2BMQ99879 126 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 UPK3BQ9BT76 320 aa4.74□□□□□ -1.65
TRIM53CP-201ENST00000531490 PRSS47A8MTI9 375 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 HIGD1CA8MV81 97 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 M0R381 172 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 CRYGDP07320 174 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 GZMBP10144 247 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 S100A2P29034 98 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 SRIP30626 198 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 RIGQ13278 110 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 NUP35Q8NFH5 326 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 OR2D3Q8NGH3 330 aa4.73□□□□□ -1.65
TRIM53CP-201ENST00000531490 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 PHOX2AO14813 284 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 SIVA1O15304 175 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 NXPH4O95158 308 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 KRTAP10-1P60331 282 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 RAB4BP61018 213 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 HBBP68871 147 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 COA6Q5JTJ3 125 aaKnown RBP4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 WFDC10BQ8IUB3 73 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 OR10AG1Q8NH19 301 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
TRIM53CP-201ENST00000531490 A0A1B0GUT8 65 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 A8MWV9 139 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 F2Z2F3 143 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 CIDEAO60543 219 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 APCSP02743 223 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 AKR1D1P51857 326 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 OR10J3Q5JRS4 329 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 PIK3CD-AS1Q5SR53 167 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 FAM74A4Q5TZK3 123 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 ZFP2Q6ZN57 461 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 MSRB1Q9NZV6 116 aa4.71□□□□□ -1.66
TRIM53CP-201ENST00000531490 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 Q0VG73 95 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 GAGE1Q13065 139 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 GAGE4Q13068 117 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 GAGE5Q13069 117 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 RHOHQ15669 191 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 TMEM136Q6ZRR5 245 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 TMEM18Q96B42 140 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
TRIM53CP-201ENST00000531490 A0A1B0GXF2 115 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 SNAI2O43623 268 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 LINC00315P59091 139 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 Q6ZRN7 208 aaPredicted RBP4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 ATP6V0E2Q8NHE4 81 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 PGLYRP4Q96LB8 373 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 TPPP3Q9BW30 176 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 KIF25-AS1Q9Y6Z4 181 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 DNAH8Q96JB1 4490 aa4.69□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGHV3-38A0A0C4DH36 116 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 OR5AL1P0C617 328 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGLC6P0CF74 106 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 DNAH10OSP0CZ25 163 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms