RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CST9LP1Q5W188 147 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 INO80EQ8NBZ0 244 aaPredicted RBP3.96□□□□□ -1.78
PABPC1-220ENST00000522658 SPACA4Q8TDM5 124 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 TCEAL7Q9BRU2 100 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 TMEM243Q9BU79 118 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 WFDC1Q9HC57 220 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 NDUFA13Q9P0J0 144 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 LINC00474Q9P2X8 69 aa3.96□□□□□ -1.78
PABPC1-220ENST00000522658 IGKV3OR2-268A0A0C4DH90 116 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 NDUFS6O75380 124 aaKnown RBP3.95□□□□□ -1.78
PABPC1-220ENST00000522658 CHTF8P0CG12 524 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 RAB5CP51148 216 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 PRR27Q6MZM9 219 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 SDIM1Q6ZPB5 146 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 STPG4Q8N801 248 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 LYPD6BQ8NI32 183 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 TPPP3Q9BW30 176 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 PRR34Q9NV39 138 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 TNFSF18Q9UNG2 199 aa3.95□□□□□ -1.78
PABPC1-220ENST00000522658 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 FAM74A7A6NL05 159 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 PANO1I0J062 215 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 GAS8-AS1O95177 125 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 RPS10P46783 165 aaKnown RBP3.94□□□□□ -1.78
PABPC1-220ENST00000522658 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
PABPC1-220ENST00000522658 PRR3P79522 188 aaKnown RBP3.94□□□□□ -1.78
PABPC1-220ENST00000522658 COX6A2Q02221 97 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 CIRBPQ14011 172 aaKnown RBP3.94□□□□□ -1.78
PABPC1-220ENST00000522658 COTL1Q14019 142 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 AMMECR1LQ6DCA0 310 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 SUN5Q8TC36 379 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 AQP10Q96PS8 301 aa3.94□□□□□ -1.78
PABPC1-220ENST00000522658 MUC21A0A0G2JKD1 596 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 A0A0J9YXV3 536 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 MUC21A0A140T8X8 626 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 XKRY2A2RUG3 117 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 MAP1LC3B2A6NCE7 125 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 UPK1BO75841 260 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 LTAP01374 205 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 S100A9P06702 114 aaKnown RBP3.93□□□□□ -1.78
PABPC1-220ENST00000522658 CXCL1P09341 107 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 AMTP48728 403 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 IQCJQ1A5X6 159 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 ZNF674Q2M3X9 581 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 SPINK6Q6UWN8 80 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 OR10AG1Q8NH19 301 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 MAP1LC3BQ9GZQ8 125 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 VAX2Q9UIW0 290 aa3.93□□□□□ -1.78
PABPC1-220ENST00000522658 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 FXYD6-FXYD2A0A087WZ82 144 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 TRAV26-2A0A0B4J265 109 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 FAM231BA6NCW3 169 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 TRGC1P0CF51 173 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 NKX2-5P52952 324 aaPredicted RBP3.92□□□□□ -1.78
PABPC1-220ENST00000522658 Q6ZRP5 223 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 MPLKIPQ8TAP9 179 aa3.92□□□□□ -1.78
PABPC1-220ENST00000522658 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 SNAI2O43623 268 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 OR5AL1P0C617 328 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 MT3P25713 68 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 CRIP1P50238 77 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 CACNG7P62955 275 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 RPL7L1Q6DKI1 246 aaKnown RBP3.91□□□□□ -1.78
PABPC1-220ENST00000522658 RNASEKQ6P5S7 137 aaKnown RBP3.91□□□□□ -1.78
PABPC1-220ENST00000522658 RASL11AQ6T310 242 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 LINC00299Q6ZSB3 139 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 NTM-AS1Q6ZSK4 140 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 COX8CQ7Z4L0 72 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 BAGE2Q86Y30 109 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 C20orf203Q8NBC4 194 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 ISOC2Q96AB3 205 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 BTF3L4Q96K17 158 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 CARD19Q96LW7 228 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 MARVELD1Q9BSK0 173 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 MED28Q9H204 178 aa3.91□□□□□ -1.78
PABPC1-220ENST00000522658 IGLV4-60A0A075B6I1 120 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 APCSP02743 223 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 MT-ND6P03923 174 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 FHITP49789 147 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 RPS20P60866 119 aaKnown RBP3.9□□□□□ -1.79
PABPC1-220ENST00000522658 SMIM15Q7Z3B0 74 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 FER1L6-AS1Q8NA97 138 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 CHCHD10Q8WYQ3 142 aaPredicted RBP3.9□□□□□ -1.79
PABPC1-220ENST00000522658 TMEM101Q96IK0 257 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
PABPC1-220ENST00000522658 A0A096LNI7 61 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 A0A1B0GV50 99 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 PAGE4O60829 102 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 ZNF726P1Q15940 193 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 KRTAP26-1Q6PEX3 210 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 ZNF664Q8N3J9 261 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 C15orf56Q8N910 161 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 OR2D3Q8NGH3 330 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 NIT2Q9NQR4 276 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 ALG5Q9Y673 324 aa3.89□□□□□ -1.79
PABPC1-220ENST00000522658 GVQW2A0A096LPI5 108 aaPredicted RBP3.88□□□□□ -1.79
PABPC1-220ENST00000522658 IGHV1-58A0A0C4DH39 117 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms