RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 WT1-ASQ06250 92 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 PMCHL1Q16048 86 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 LTC4SQ16873 150 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 C10orf55Q5SWW7 151 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 FAM201AQ5SY85 155 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 PATE2Q6UY27 113 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 LINC00311Q8N616 119 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 FAM216BQ8N7L0 139 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 SIGLECL1Q8N7X8 197 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 CNEP1R1Q8N9A8 125 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 C5orf17Q8NAS9 161 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 NUP35Q8NFH5 326 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR10X1Q8NGY0 326 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM167AQ8TBQ9 72 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 LEAP2Q969E1 77 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 ENY2Q9NPA8 101 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 NDUFA4L2Q9NRX3 87 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 MRPL16Q9NX20 251 aaKnown RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 MRPL36Q9P0J6 103 aaKnown RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TP73-AS1Q9UF72 201 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 LAMTOR2Q9Y2Q5 125 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 FAM215AQ9Y5M1 114 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 LINC00312Q9Y6C7 94 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 MINOS1-NBL1R4GNA1 71 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TLN1Q9Y490 2541 aaKnown RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TTC28Q96AY4 2481 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 EP300Q09472 2414 aaPredicted RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TNRC18O15417 2968 aaPredicted RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 ANKRD11Q6UB99 2663 aaPredicted RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 BDP1A6H8Y1 2624 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 MUC6Q6W4X9 2439 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 GVINP1Q7Z2Y8 2422 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 CR1P17927 2039 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGHV3-73A0A0B4J1V6 119 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TRAV5A0A0B4J249 113 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TRAV17A0A0B4J275 112 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 hADV38S2A0JD32 116 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 DPRXA6NFQ7 191 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 A8MUN3 132 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 HIGD1CA8MV81 97 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR11H12B2RN74 326 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 E7EUB6 86 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 SYS1-DBNDD2H3BUS1 97 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 K7EP13 123 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 M0R2Z0 102 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 COX7A2LO14548 114 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TAX1BP3O14907 124 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 CCL25O15444 150 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 SPINK4O60575 86 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGHV3-7P01780 117 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 PPBPP02775 128 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TCRAP04437 139 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 MGST1P10620 155 aaKnown RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 FGF6P10767 208 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 SLC25A16P16260 332 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 HBBP68871 147 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 RHOGP84095 191 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 SRSF6Q13247 344 aaKnown RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 BATFQ16520 125 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM155Q4W5P6 130 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 LINC01545Q5VT33 79 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 C10orf113Q5VZT2 155 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 UNQ5815/PRO19632Q6UWF5 114 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 LINC00322Q6ZN03 302 aaPredicted RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 ATOH7Q8N100 152 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 FAM19A2Q8N3H0 131 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 DAND5Q8N907 189 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 FDCSPQ8NFU4 85 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR11H2Q8NH07 326 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 VSTM2AQ8TAG5 236 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 H1FXQ92522 213 aaKnown RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 CHCHD1Q96BP2 118 aaKnown RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TRGV9Q99603 122 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 FAM103A1Q9BTL3 118 aaKnown RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 ST20Q9HBF5 79 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 OTORQ9NRC9 128 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM14CQ9P0S9 112 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 PSORS1C2Q9UIG4 136 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 AMMECR1Q9Y4X0 333 aaPredicted RBP1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 PRUNE2Q8WUY3 3088 aa1.51□□□□□ -2.17
HMGN1P28-201ENST00000521340 WDFY3Q8IZQ1 3526 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 TRAV30A0A087WSZ9 112 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 MUC21A0A0G2JKD1 596 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 MUC21A0A140T8X8 626 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR4C46A6NHA9 309 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 H3BRN7 92 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 RBP4P02753 201 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 SLC25A5P05141 298 aaKnown RBP1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGLC1P0CG04 106 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 CCL3L1P16619 93 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 RPL27AP46776 148 aaKnown RBP1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 HINT1P49773 126 aaPredicted RBP1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 ERHP84090 104 aaKnown RBP1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 HIST1H1AQ02539 215 aaPredicted RBP1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 DIAPH2-AS1Q14236 149 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 VMA21Q3ZAQ7 101 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 Q56UQ5 140 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 BVES-AS1Q5T3Y7 98 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 Q6AWC8 147 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 Q6ZS92 163 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms