RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SH2D6Q7Z4S9 175 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 DAZ4Q86SG3 579 aaKnown RBP5.33□□□□□ -1.56
SDCBP-206ENST00000519115 URB1-AS1Q96HZ7 61 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 TMEM70Q9BUB7 260 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 SAMD10Q9BYL1 202 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 JPT2Q9H910 190 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 DAZ3Q9NR90 486 aaKnown RBP5.33□□□□□ -1.56
SDCBP-206ENST00000519115 APLNQ9ULZ1 77 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 TRBV7-3A0A075B6L6 115 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 A0A087WWL8 130 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 SDHAF1A6NFY7 115 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 F5H768 121 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 I3L3M4 83 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 HBDP02042 147 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 MGPP08493 103 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 CRYBA4P53673 196 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 RPL36AP83881 106 aaKnown RBP5.32□□□□□ -1.56
SDCBP-206ENST00000519115 RHOHQ15669 191 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 ZNF56Q15929 161 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
SDCBP-206ENST00000519115 GTSF1LQ9H1H1 148 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 PRO0255Q9UI72 69 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 TNFRSF18Q9Y5U5 241 aa5.32□□□□□ -1.56
SDCBP-206ENST00000519115 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 H7C423 109 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 K7EQD1 137 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 NUPR1O60356 82 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 ATP5LO75964 103 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 LEPROTL1O95214 131 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 ATP5G1P05496 136 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 FABP4P15090 132 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 AMTP48728 403 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 TCTAP57738 103 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 FHL2Q14192 279 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 JOSD1Q15040 202 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-206ENST00000519115 FAM74A4Q5TZK3 123 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 RNASEKQ6P5S7 137 aaKnown RBP5.31□□□□□ -1.56
SDCBP-206ENST00000519115 PRADC1Q9BSG0 188 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 MRPL16Q9NX20 251 aaKnown RBP5.31□□□□□ -1.56
SDCBP-206ENST00000519115 HHLA3Q9XRX5 114 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 LYSTQ99698 3801 aa5.31□□□□□ -1.56
SDCBP-206ENST00000519115 SACSQ9NZJ4 4579 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 TRAV26-1A0A087WT03 109 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 TRAV26-2A0A0B4J265 109 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 SMKR1H3BMG3 65 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 IQCJQ1A5X6 159 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 LGALS9CQ6DKI2 356 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 PET117Q6UWS5 81 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 SLC25A29Q8N8R3 303 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 NEXN-AS1Q8NBZ9 246 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 ZNF479Q96JC4 524 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 DNAH1Q9P2D7 4330 aa5.3□□□□□ -1.56
SDCBP-206ENST00000519115 TRGV4A0A0C4DH28 118 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 IGHV1-24A0A0C4DH33 117 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 A0A0J9YY99 117 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 LOC389332A0A1B0GUA5 103 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
SDCBP-206ENST00000519115 TIRAPP58753 221 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 UBE2D3P61077 147 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 UBE2D2P62837 147 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 ERASQ7Z444 233 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 OR10D4PQ8NGN7 298 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 RPL39LQ96EH5 51 aaKnown RBP5.29□□□□□ -1.56
SDCBP-206ENST00000519115 TMEM141Q96I45 108 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 MAP1LC3CQ9BXW4 147 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
SDCBP-206ENST00000519115 CSDC2Q9Y534 153 aaKnown RBP5.29□□□□□ -1.56
SDCBP-206ENST00000519115 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
SDCBP-206ENST00000519115 A0A096LNJ9 63 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 TRAV12-1A0A0B4J245 112 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 GAS8-AS1O95177 125 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 NUDT3O95989 172 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 PKIAP61925 76 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 COTL1Q14019 142 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 PMCHL1Q16048 86 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 Q6ZSN1 163 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 C20orf203Q8NBC4 194 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 TIMM17AQ99595 171 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 CYSLTR1Q9Y271 337 aa5.28□□□□□ -1.56
SDCBP-206ENST00000519115 C20orf202A1L168 122 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-206ENST00000519115 P0DMU3 169 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 FAM231AP0DMU4 169 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 FAM231CP0DMU5 169 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 LINC00694P0DN24 101 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
SDCBP-206ENST00000519115 UBE2DNLQ8IWF7 75 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 FAM19A2Q8N3H0 131 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 C15orf53Q8NAA6 179 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
SDCBP-206ENST00000519115 IGIPA6NJ69 53 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 SYS1-DBNDD2H3BUS1 97 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 PAX4O43316 350 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 TSHBP01222 138 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms