RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CARD19Q96LW7 228 aa6.65□□□□□ -1.34
DDX41-216ENST00000513562 TCEAL7Q9BRU2 100 aa6.65□□□□□ -1.34
DDX41-216ENST00000513562 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
DDX41-216ENST00000513562 SSTP61278 116 aa6.64□□□□□ -1.35
DDX41-216ENST00000513562 FOXI1Q12951 378 aa6.64□□□□□ -1.35
DDX41-216ENST00000513562 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
DDX41-216ENST00000513562 MT-ND6P03923 174 aa6.63□□□□□ -1.35
DDX41-216ENST00000513562 MGPP08493 103 aa6.63□□□□□ -1.35
DDX41-216ENST00000513562 GIPP09681 153 aaPredicted RBP6.63□□□□□ -1.35
DDX41-216ENST00000513562 AKR1C3P42330 323 aa6.63□□□□□ -1.35
DDX41-216ENST00000513562 AMTP48728 403 aa6.63□□□□□ -1.35
DDX41-216ENST00000513562 LINC00526Q96FQ7 95 aa6.63□□□□□ -1.35
DDX41-216ENST00000513562 FHITP49789 147 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 COTL1Q14019 142 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 C1orf137Q5JT78 98 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 RASL11AQ6T310 242 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 AKAP14Q86UN6 197 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 FER1L6-AS1Q8NA97 138 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 MLST8Q9BVC4 326 aa6.62□□□□□ -1.35
DDX41-216ENST00000513562 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
DDX41-216ENST00000513562 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
DDX41-216ENST00000513562 A0A1B0GVG6 124 aa6.61□□□□□ -1.35
DDX41-216ENST00000513562 NIT2Q9NQR4 276 aa6.61□□□□□ -1.35
DDX41-216ENST00000513562 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
DDX41-216ENST00000513562 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
DDX41-216ENST00000513562 STOML3Q8TAV4 291 aa6.6□□□□□ -1.35
DDX41-216ENST00000513562 LOC107984640A0A0U1RRK4 108 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 MAP1LC3B2A6NCE7 125 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 H0Y9J4 135 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 IGLV7-43P04211 117 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 S100A9P06702 114 aaKnown RBP6.59□□□□□ -1.35
DDX41-216ENST00000513562 KRTAP1-4P0C5Y4 121 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 XCL1P47992 114 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 AMMECR1LQ6DCA0 310 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 MAP1LC3BQ9GZQ8 125 aa6.59□□□□□ -1.35
DDX41-216ENST00000513562 FXYD6-FXYD2A0A087WZ82 144 aa6.58□□□□□ -1.36
DDX41-216ENST00000513562 PFDN1O60925 122 aa6.58□□□□□ -1.36
DDX41-216ENST00000513562 IGLC6P0CF74 106 aa6.58□□□□□ -1.36
DDX41-216ENST00000513562 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
DDX41-216ENST00000513562 RPL7L1Q6DKI1 246 aaKnown RBP6.58□□□□□ -1.36
DDX41-216ENST00000513562 BAGE2Q86Y30 109 aa6.58□□□□□ -1.36
DDX41-216ENST00000513562 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 CCL25O15444 150 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 FGF6P10767 208 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 NTF3P20783 257 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 CAMPP49913 170 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
DDX41-216ENST00000513562 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
DDX41-216ENST00000513562 TCTE3Q8IZS6 198 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 OR5A1Q8NGJ0 315 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 ISOC2Q96AB3 205 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
DDX41-216ENST00000513562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.56□□□□□ -1.36
DDX41-216ENST00000513562 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 SCO2A0A1W2PP80 73 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 IGKV2-29A2NJV5 120 aaPredicted RBP6.56□□□□□ -1.36
DDX41-216ENST00000513562 H7C423 109 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 NCR2O95944 276 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 BCL2P10415 239 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 AKR1C8PQ5T2L2 129 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
DDX41-216ENST00000513562 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
DDX41-216ENST00000513562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
DDX41-216ENST00000513562 SMLR1H3BR10 107 aa6.55□□□□□ -1.36
DDX41-216ENST00000513562 PAGE4O60829 102 aa6.55□□□□□ -1.36
DDX41-216ENST00000513562 APOMO95445 188 aa6.55□□□□□ -1.36
DDX41-216ENST00000513562 TRGC1P0CF51 173 aa6.55□□□□□ -1.36
DDX41-216ENST00000513562 ZNF25P17030 456 aaPredicted RBP6.55□□□□□ -1.36
DDX41-216ENST00000513562 RPL13AP40429 203 aaKnown RBP6.55□□□□□ -1.36
DDX41-216ENST00000513562 MEF2BQ02080 365 aaPredicted RBP6.55□□□□□ -1.36
DDX41-216ENST00000513562 NUP35Q8NFH5 326 aa6.55□□□□□ -1.36
DDX41-216ENST00000513562 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 TRAV1-1A0A0B4J248 108 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 ARPC5O15511 151 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 APCSP02743 223 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 UBE2D1P51668 147 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 EIF5AP63241 154 aaKnown RBP6.54□□□□□ -1.36
DDX41-216ENST00000513562 Q5BKY6 102 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 CD164L2Q6UWJ8 174 aa6.54□□□□□ -1.36
DDX41-216ENST00000513562 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
DDX41-216ENST00000513562 F2Z2F3 143 aa6.53□□□□□ -1.36
DDX41-216ENST00000513562 RPS20P60866 119 aaKnown RBP6.53□□□□□ -1.36
DDX41-216ENST00000513562 GATD1Q8NB37 220 aa6.53□□□□□ -1.36
DDX41-216ENST00000513562 A0A087WZ39 114 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 HMSDA8MTL9 139 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 G3V3Q6 166 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 RPL18AQ02543 176 aaKnown RBP6.52□□□□□ -1.37
DDX41-216ENST00000513562 ZNF345Q14585 488 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 SS18Q15532 418 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 TMUB2Q71RG4 321 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 OR2D3Q8NGH3 330 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 BTF3L4Q96K17 158 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 CAMK2N2Q96S95 79 aa6.52□□□□□ -1.37
DDX41-216ENST00000513562 KANTRA0A1W2PQU2 76 aa6.51□□□□□ -1.37
DDX41-216ENST00000513562 RPL35P42766 123 aaKnown RBP6.51□□□□□ -1.37
DDX41-216ENST00000513562 EIF5AL1Q6IS14 154 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms