RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 NXT2Q9NPJ8 142 aaKnown RBP3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 GOLT1BQ9Y3E0 138 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 NIPBLQ6KC79 2804 aaeCLIP3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 KIR2DL5BA0A0G2JN68 375 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 KIR2DL5BA0A0G2JPC4 375 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 A8MWV9 139 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 D6R8Y8 96 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 M0R2P5 195 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 LINC00614P0C842 121 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 VPREB1P12018 145 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 FABP4P15090 132 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 EVI2AP22794 236 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 Q6ZQT7 251 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 FA2HQ7L5A8 372 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 NIT1Q86X76 327 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 KIR2DL5AQ8N109 375 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 KIR2DL5BQ8NHK3 375 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 LINC01587Q99440 93 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 C20orf78Q9BR46 151 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 TMEM208Q9BTX3 173 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 SAMD10Q9BYL1 202 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 MAP1LC3AQ9H492 121 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 EDA2RQ9HAV5 297 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 MAST4O15021 2626 aa3.43□□□□□ -1.86
DEPDC1B-203ENST00000505017 MUC21A0A0G2JKD1 596 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 MUC21A0A140T8X8 626 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 SMIM9A6NGZ8 99 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 LINC01549A6NIU2 74 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 H7C1H1 209 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 TCAPO15273 167 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 RBMY1A1P0DJD3 496 aaKnown RBP3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 G0S2P27469 103 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 APOC4P55056 127 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 FXYD7P58549 80 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 RBMY1FQ15415 496 aaKnown RBP3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 LGALS9BQ3B8N2 356 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 RNASEKQ6P5S7 137 aaKnown RBP3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 ZNF705AQ6ZN79 300 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 LINC00518Q8N0U6 118 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 C1orf158Q8N1D5 194 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 OR10D4PQ8NGN7 298 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 TMEM263Q8WUH6 116 aaKnown RBP3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 C16orf74Q96GX8 76 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 RCHY1Q96PM5 261 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 XCL2Q9UBD3 114 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 KIF25-AS1Q9Y6Z4 181 aa3.42□□□□□ -1.86
DEPDC1B-203ENST00000505017 TRBV6-5A0A0K0K1A5 114 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 NUPR1O60356 82 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 NPYP01303 97 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 LINC00315P59091 139 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 EGFEM1PQ0D2K5 195 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 JOSD1Q15040 202 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 IQCJQ1A5X6 159 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 RRN3P1Q2M238 152 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 PDZD11Q5EBL8 140 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 ZFP2Q6ZN57 461 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 C14orf178Q8N769 122 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 Q8N8P6 123 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 C11orf72Q8NBR9 251 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 CSNK1G2-AS1Q8NCQ2 148 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 RNASE8Q8TDE3 154 aaKnown RBP3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 HSPB8Q9UJY1 196 aa3.41□□□□□ -1.86
DEPDC1B-203ENST00000505017 TENM1Q9UKZ4 2725 aa3.4□□□□□ -1.86
DEPDC1B-203ENST00000505017 IGLV2-18A0A075B6J9 118 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 IGHV1-24A0A0C4DH33 117 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 RS1O15537 224 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 LEPROTL1O95214 131 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 NCR2O95944 276 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 HBDP02042 147 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 CRYGDP07320 174 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 MGPP08493 103 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 IGLL1P15814 213 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 RPL35AP18077 110 aaKnown RBP3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 IFI27P40305 119 aaPredicted RBP3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 SSTP61278 116 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 ORMDL2Q53FV1 153 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 PYY3Q5JQD4 70 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 C2orf48Q96LS8 159 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 C12orf57Q99622 126 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 ST20Q9HBF5 79 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 NACAE9PAV3 2078 aa3.4□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRAV4A0A0B4J268 109 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRBV27A0A0K0K1C4 114 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 LOC389332A0A1B0GUA5 103 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 C20orf202A1L168 122 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 SMKR1H3BMG3 65 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 M0QY20 66 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 HTN1P15515 57 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 FCER1GP30273 86 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 POLR2KP53803 58 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms