RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 FBN3Q75N90 2809 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 TEX48A0A1B0GUV7 120 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 HSBP1O75506 76 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 AMTP48728 403 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 SPATA12Q7Z6I5 190 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 Q8N976 141 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 DEFB104AQ8WTQ1 72 aa7.26□□□□□ -1.25
TPM3-217ENST00000504663 TRGV4A0A0C4DH28 118 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 K7EMI3 77 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 VCYO14598 125 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 RHOHQ15669 191 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 NTM-AS1Q6ZSK4 140 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 Q6ZTC4 211 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 CHCHD7Q9BUK0 85 aa7.25□□□□□ -1.25
TPM3-217ENST00000504663 VPS13DQ5THJ4 4388 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 TRBV7-3A0A075B6L6 115 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 GAGE12JA6NER3 117 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 I3L3M4 83 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 HBDP02042 147 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 ATP5G1P05496 136 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 FCER1GP30273 86 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 NANOS2P60321 138 aaKnown RBP7.24□□□□□ -1.25
TPM3-217ENST00000504663 GAGE1Q13065 139 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 GAGE4Q13068 117 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 GAGE5Q13069 117 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 LAGE3Q14657 143 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 GAGE13Q4V321 117 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 OR10D4PQ8NGN7 298 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 FAM104AQ969W3 186 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 TMEM18Q96B42 140 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 PRO0255Q9UI72 69 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
TPM3-217ENST00000504663 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
TPM3-217ENST00000504663 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
TPM3-217ENST00000504663 DEFA6Q01524 100 aa7.23□□□□□ -1.25
TPM3-217ENST00000504663 PHLDA1Q8WV24 401 aaPredicted RBP7.23□□□□□ -1.25
TPM3-217ENST00000504663 TNFRSF18Q9Y5U5 241 aa7.23□□□□□ -1.25
TPM3-217ENST00000504663 C3orf79P0CE67 100 aa7.22□□□□□ -1.25
TPM3-217ENST00000504663 S100A2P29034 98 aa7.22□□□□□ -1.25
TPM3-217ENST00000504663 RPL39P62891 51 aaKnown RBP7.22□□□□□ -1.25
TPM3-217ENST00000504663 RPL36AP83881 106 aaKnown RBP7.22□□□□□ -1.25
TPM3-217ENST00000504663 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
TPM3-217ENST00000504663 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
TPM3-217ENST00000504663 RPL36ALQ969Q0 106 aaKnown RBP7.22□□□□□ -1.25
TPM3-217ENST00000504663 TOMM6Q96B49 74 aa7.22□□□□□ -1.25
TPM3-217ENST00000504663 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 A0A0J9YY99 117 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 GYPEP15421 78 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 C2orf66Q6UXQ4 117 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 C20orf203Q8NBC4 194 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 KIR2DL4Q99706 377 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 PRADC1Q9BSG0 188 aa7.21□□□□□ -1.26
TPM3-217ENST00000504663 A0A096LPF7 62 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 IGIPA6NJ69 53 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 F5H768 121 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 PAX4O43316 350 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 LEPROTL1O95214 131 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 NUDT3O95989 172 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 DAZ4Q86SG3 579 aaKnown RBP7.2□□□□□ -1.26
TPM3-217ENST00000504663 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
TPM3-217ENST00000504663 DAZ3Q9NR90 486 aaKnown RBP7.2□□□□□ -1.26
TPM3-217ENST00000504663 H3BNG1 76 aa7.19□□□□□ -1.26
TPM3-217ENST00000504663 HTN3P15516 51 aa7.19□□□□□ -1.26
TPM3-217ENST00000504663 AKR1D1P51857 326 aa7.19□□□□□ -1.26
TPM3-217ENST00000504663 JOSD1Q15040 202 aaPredicted RBP7.19□□□□□ -1.26
TPM3-217ENST00000504663 GTSF1LQ9H1H1 148 aa7.19□□□□□ -1.26
TPM3-217ENST00000504663 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.18□□□□□ -1.26
TPM3-217ENST00000504663 IGKV2-29A2NJV5 120 aaPredicted RBP7.18□□□□□ -1.26
TPM3-217ENST00000504663 SYS1-DBNDD2H3BUS1 97 aa7.18□□□□□ -1.26
TPM3-217ENST00000504663 COTL1Q14019 142 aa7.18□□□□□ -1.26
TPM3-217ENST00000504663 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
TPM3-217ENST00000504663 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
TPM3-217ENST00000504663 NHLRC4P0CG21 123 aaPredicted RBP7.17□□□□□ -1.26
TPM3-217ENST00000504663 KRTDAPP60985 99 aa7.17□□□□□ -1.26
TPM3-217ENST00000504663 ATP6V0E2Q8NHE4 81 aa7.17□□□□□ -1.26
TPM3-217ENST00000504663 IFI27L1Q96BM0 104 aa7.17□□□□□ -1.26
TPM3-217ENST00000504663 TIMM17AQ99595 171 aa7.17□□□□□ -1.26
TPM3-217ENST00000504663 HSPB8Q9UJY1 196 aa7.17□□□□□ -1.26
TPM3-217ENST00000504663 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
TPM3-217ENST00000504663 IGLV4-3A0A075B6K6 122 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 DEFB131BA0A096LNP1 70 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 SMIM6P0DI80 62 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 LINC01545Q5VT33 79 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 CEMP1Q6PRD7 247 aaPredicted RBP7.16□□□□□ -1.26
TPM3-217ENST00000504663 ERASQ7Z444 233 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 MRPL52Q86TS9 123 aaKnown RBP7.16□□□□□ -1.26
TPM3-217ENST00000504663 BAALCQ8WXS3 180 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
TPM3-217ENST00000504663 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
TPM3-217ENST00000504663 TRAV10A0A0B4J240 114 aa7.15□□□□□ -1.26
TPM3-217ENST00000504663 PET117Q6UWS5 81 aa7.15□□□□□ -1.26
TPM3-217ENST00000504663 LINC00518Q8N0U6 118 aa7.15□□□□□ -1.26
TPM3-217ENST00000504663 SCGB3A1Q96QR1 104 aa7.15□□□□□ -1.26
TPM3-217ENST00000504663 LYSTQ99698 3801 aa7.15□□□□□ -1.26
TPM3-217ENST00000504663 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
TPM3-217ENST00000504663 ICOSQ9Y6W8 199 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms