RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SULT1A2P50226 295 aa8.25□□□□□ -1.09
COL1A1-209ENST00000495677 ZNF345Q14585 488 aa8.25□□□□□ -1.09
COL1A1-209ENST00000495677 HIGD2BQ4VC39 106 aa8.25□□□□□ -1.09
COL1A1-209ENST00000495677 KCNRGQ8N5I3 272 aa8.25□□□□□ -1.09
COL1A1-209ENST00000495677 AP1S3Q96PC3 154 aa8.25□□□□□ -1.09
COL1A1-209ENST00000495677 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
COL1A1-209ENST00000495677 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
COL1A1-209ENST00000495677 S100A9P06702 114 aaKnown RBP8.24□□□□□ -1.09
COL1A1-209ENST00000495677 CYTL1Q9NRR1 136 aa8.24□□□□□ -1.09
COL1A1-209ENST00000495677 A0A1B0GV50 99 aa8.23□□□□□ -1.09
COL1A1-209ENST00000495677 HMSDA8MTL9 139 aa8.23□□□□□ -1.09
COL1A1-209ENST00000495677 LCE2AQ5TA79 106 aaPredicted RBP8.23□□□□□ -1.09
COL1A1-209ENST00000495677 TMUB2Q71RG4 321 aa8.23□□□□□ -1.09
COL1A1-209ENST00000495677 TCTE3Q8IZS6 198 aa8.23□□□□□ -1.09
COL1A1-209ENST00000495677 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
COL1A1-209ENST00000495677 UBE2L6O14933 153 aa8.22□□□□□ -1.09
COL1A1-209ENST00000495677 AKR1C3P42330 323 aa8.22□□□□□ -1.09
COL1A1-209ENST00000495677 RASL11AQ6T310 242 aa8.22□□□□□ -1.09
COL1A1-209ENST00000495677 NIT2Q9NQR4 276 aa8.22□□□□□ -1.09
COL1A1-209ENST00000495677 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
COL1A1-209ENST00000495677 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
COL1A1-209ENST00000495677 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
COL1A1-209ENST00000495677 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
COL1A1-209ENST00000495677 MAP1LC3BQ9GZQ8 125 aa8.21□□□□□ -1.1
COL1A1-209ENST00000495677 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
COL1A1-209ENST00000495677 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
COL1A1-209ENST00000495677 AMTP48728 403 aa8.19□□□□□ -1.1
COL1A1-209ENST00000495677 SSTP61278 116 aa8.19□□□□□ -1.1
COL1A1-209ENST00000495677 FOXI1Q12951 378 aa8.19□□□□□ -1.1
COL1A1-209ENST00000495677 COTL1Q14019 142 aa8.19□□□□□ -1.1
COL1A1-209ENST00000495677 CST9LP1Q5W188 147 aa8.19□□□□□ -1.1
COL1A1-209ENST00000495677 BAGE2Q86Y30 109 aa8.19□□□□□ -1.1
COL1A1-209ENST00000495677 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
COL1A1-209ENST00000495677 H7C423 109 aa8.18□□□□□ -1.1
COL1A1-209ENST00000495677 MGPP08493 103 aa8.18□□□□□ -1.1
COL1A1-209ENST00000495677 PTTG1IPP53801 180 aa8.18□□□□□ -1.1
COL1A1-209ENST00000495677 EIF5AP63241 154 aaKnown RBP8.18□□□□□ -1.1
COL1A1-209ENST00000495677 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
COL1A1-209ENST00000495677 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
COL1A1-209ENST00000495677 IGLC6P0CF74 106 aa8.17□□□□□ -1.1
COL1A1-209ENST00000495677 CACNG7P62955 275 aa8.17□□□□□ -1.1
COL1A1-209ENST00000495677 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
COL1A1-209ENST00000495677 C9orf62Q8N4C0 152 aa8.16□□□□□ -1.1
COL1A1-209ENST00000495677 PRR26Q8N8Z3 221 aa8.16□□□□□ -1.1
COL1A1-209ENST00000495677 A0A1W2PNN7 141 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 PAGE4O60829 102 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 NCR2O95944 276 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 OR5A1Q8NGJ0 315 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 SFT2D1Q8WV19 159 aa8.15□□□□□ -1.1
COL1A1-209ENST00000495677 IGLV1-50A0A075B6I6 118 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 LOC107984640A0A0U1RRK4 108 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 UMAD1C9J7I0 102 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 F2Z2F3 143 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 MT-ND6P03923 174 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 TRGC1P0CF51 173 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 NTF3P20783 257 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 RPS20P60866 119 aaKnown RBP8.14□□□□□ -1.11
COL1A1-209ENST00000495677 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
COL1A1-209ENST00000495677 SCO2A0A1W2PP80 73 aa8.13□□□□□ -1.11
COL1A1-209ENST00000495677 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
COL1A1-209ENST00000495677 H2AFB1P0C5Y9 115 aa8.13□□□□□ -1.11
COL1A1-209ENST00000495677 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
COL1A1-209ENST00000495677 AMMECR1LQ6DCA0 310 aa8.13□□□□□ -1.11
COL1A1-209ENST00000495677 EIF5AL1Q6IS14 154 aaKnown RBP8.13□□□□□ -1.11
COL1A1-209ENST00000495677 SLC51BQ86UW2 128 aa8.13□□□□□ -1.11
COL1A1-209ENST00000495677 LINC00526Q96FQ7 95 aa8.13□□□□□ -1.11
COL1A1-209ENST00000495677 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
COL1A1-209ENST00000495677 FGF6P10767 208 aa8.12□□□□□ -1.11
COL1A1-209ENST00000495677 C1orf137Q5JT78 98 aa8.12□□□□□ -1.11
COL1A1-209ENST00000495677 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
COL1A1-209ENST00000495677 ISOC2Q96AB3 205 aa8.12□□□□□ -1.11
COL1A1-209ENST00000495677 FAT4Q6V0I7 4981 aa8.12□□□□□ -1.11
COL1A1-209ENST00000495677 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
COL1A1-209ENST00000495677 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
COL1A1-209ENST00000495677 PRR4Q16378 134 aa8.11□□□□□ -1.11
COL1A1-209ENST00000495677 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-209ENST00000495677 ALKAL2Q6UX46 152 aa8.11□□□□□ -1.11
COL1A1-209ENST00000495677 MBD3L1Q8WWY6 194 aa8.11□□□□□ -1.11
COL1A1-209ENST00000495677 GNG13Q9P2W3 67 aa8.11□□□□□ -1.11
COL1A1-209ENST00000495677 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 H0Y9J4 135 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 CCL25O15444 150 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 XCL1P47992 114 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 CAMPP49913 170 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 CD164L2Q6UWJ8 174 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 TPPP3Q9BW30 176 aa8.1□□□□□ -1.11
COL1A1-209ENST00000495677 IGLV4-69A0A075B6H9 119 aa8.09□□□□□ -1.11
COL1A1-209ENST00000495677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.11
COL1A1-209ENST00000495677 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.11
COL1A1-209ENST00000495677 XKRY2A2RUG3 117 aa8.09□□□□□ -1.11
COL1A1-209ENST00000495677 KRTAP1-4P0C5Y4 121 aa8.09□□□□□ -1.11
COL1A1-209ENST00000495677 OR2D3Q8NGH3 330 aa8.09□□□□□ -1.11
COL1A1-209ENST00000495677 FAM210AQ96ND0 272 aa8.09□□□□□ -1.11
COL1A1-209ENST00000495677 TEX46H3BTG2 121 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 APCSP02743 223 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 RPL35P42766 123 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms