RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 NKX2-5P52952 324 aaPredicted RBP4.81□□□□□ -1.64
GARNL3-219ENST00000495172 OR10AG1Q8NH19 301 aa4.81□□□□□ -1.64
GARNL3-219ENST00000495172 SCGB3A2Q96PL1 93 aa4.81□□□□□ -1.64
GARNL3-219ENST00000495172 LYRM2Q9NU23 88 aaPredicted RBP4.81□□□□□ -1.64
GARNL3-219ENST00000495172 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
GARNL3-219ENST00000495172 ANKRD20A5PA0PJZ0 165 aa4.8□□□□□ -1.64
GARNL3-219ENST00000495172 IGSF23A1L1A6 192 aa4.8□□□□□ -1.64
GARNL3-219ENST00000495172 TAS2R30P59541 319 aa4.8□□□□□ -1.64
GARNL3-219ENST00000495172 IAH1Q2TAA2 248 aaPredicted RBP4.8□□□□□ -1.64
GARNL3-219ENST00000495172 ZFP82Q8N141 532 aa4.8□□□□□ -1.64
GARNL3-219ENST00000495172 SMIM4Q8WVI0 70 aa4.8□□□□□ -1.64
GARNL3-219ENST00000495172 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
GARNL3-219ENST00000495172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.79□□□□□ -1.64
GARNL3-219ENST00000495172 IGKV2D-26A0A0A0MRZ7 120 aa4.79□□□□□ -1.64
GARNL3-219ENST00000495172 IGKV2-29A2NJV5 120 aaPredicted RBP4.79□□□□□ -1.64
GARNL3-219ENST00000495172 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
GARNL3-219ENST00000495172 MT2AP02795 61 aa4.79□□□□□ -1.64
GARNL3-219ENST00000495172 VBP1P61758 197 aa4.79□□□□□ -1.64
GARNL3-219ENST00000495172 FLI1Q01543 452 aaPredicted RBP4.79□□□□□ -1.64
GARNL3-219ENST00000495172 C10orf25Q5T742 122 aa4.79□□□□□ -1.64
GARNL3-219ENST00000495172 RNASEKQ6P5S7 137 aaKnown RBP4.79□□□□□ -1.64
GARNL3-219ENST00000495172 ISOC2Q96AB3 205 aa4.79□□□□□ -1.64
GARNL3-219ENST00000495172 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 L7N2F9 121 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 SH2D1AO60880 128 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 TCRAP04437 139 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 TMBIM6P55061 237 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 VAMP2P63027 116 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 DNLZQ5SXM8 178 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 MCFD2Q8NI22 146 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 C11orf1Q9H5F2 150 aa4.78□□□□□ -1.64
GARNL3-219ENST00000495172 C19orf71A6NCJ1 209 aa4.77□□□□□ -1.65
GARNL3-219ENST00000495172 MT1FP04733 61 aa4.77□□□□□ -1.65
GARNL3-219ENST00000495172 SSBP1Q04837 148 aaKnown RBP4.77□□□□□ -1.65
GARNL3-219ENST00000495172 LRRC37A5PQ49AS3 106 aa4.77□□□□□ -1.65
GARNL3-219ENST00000495172 DAND5Q8N907 189 aa4.77□□□□□ -1.65
GARNL3-219ENST00000495172 PIGBOS1A0A0B4J2F0 54 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 C9orf170A2RU37 121 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 M0QY20 66 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 MGPP08493 103 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 FAM74A1Q5RGS3 127 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 AMMECR1LQ6DCA0 310 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 FLVCR2Q9UPI3 526 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 ARL2-SNX15V9GYD0 113 aa4.76□□□□□ -1.65
GARNL3-219ENST00000495172 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
GARNL3-219ENST00000495172 RPL28P46779 137 aaKnown RBP4.75□□□□□ -1.65
GARNL3-219ENST00000495172 KHDC3LQ587J8 217 aa4.75□□□□□ -1.65
GARNL3-219ENST00000495172 C9orf129Q5T035 196 aaKnown RBP4.75□□□□□ -1.65
GARNL3-219ENST00000495172 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
GARNL3-219ENST00000495172 CTDSP2O14595 271 aa4.74□□□□□ -1.65
GARNL3-219ENST00000495172 MALP21145 153 aa4.74□□□□□ -1.65
GARNL3-219ENST00000495172 SULT1A1P50225 295 aa4.74□□□□□ -1.65
GARNL3-219ENST00000495172 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
GARNL3-219ENST00000495172 MZT2AQ6P582 158 aa4.74□□□□□ -1.65
GARNL3-219ENST00000495172 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 S100A11P31949 105 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 DEFA1P59665 94 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 SPAG11BQ08648 103 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 IL18Q14116 193 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 CT83Q5H943 113 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 Q6Q795 121 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 CD164L2Q6UWJ8 174 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 UNQ6190/PRO20217Q6UXQ8 127 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 Q6ZNX1 250 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 C5orf38Q86SI9 138 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 TMEM252Q8N6L7 170 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 OR2D3Q8NGH3 330 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 KIR2DL4Q99706 377 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 C6orf48Q9UBA6 75 aa4.73□□□□□ -1.65
GARNL3-219ENST00000495172 BCE1O60756 84 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 ESDP10768 282 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 NHLH2Q02577 135 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 COTL1Q14019 142 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 C5orf17Q8NAS9 161 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 C2orf48Q96LS8 159 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 SMDT1Q9H4I9 107 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 LINC00846Q9NV44 126 aa4.72□□□□□ -1.65
GARNL3-219ENST00000495172 RGS5O15539 181 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 NUPR1O60356 82 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 MRPS10P82664 201 aaKnown RBP4.71□□□□□ -1.66
GARNL3-219ENST00000495172 SAPCD1Q5SSQ6 148 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 Q86TA4 180 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 PGLYRP4Q96LB8 373 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 EPDR1Q9UM22 224 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
GARNL3-219ENST00000495172 RPL37AP8A6NKH3 93 aa4.7□□□□□ -1.66
GARNL3-219ENST00000495172 FAM25EA8MYX2 175 aa4.7□□□□□ -1.66
GARNL3-219ENST00000495172 COX7A2LO14548 114 aa4.7□□□□□ -1.66
GARNL3-219ENST00000495172 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
GARNL3-219ENST00000495172 RNASE13Q5GAN3 156 aaKnown RBP4.7□□□□□ -1.66
GARNL3-219ENST00000495172 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
GARNL3-219ENST00000495172 C15orf40Q8WUR7 153 aa4.7□□□□□ -1.66
GARNL3-219ENST00000495172 RSL24D1Q9UHA3 163 aaKnown RBP4.7□□□□□ -1.66
GARNL3-219ENST00000495172 SERTM2A0A1B0GWG4 89 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 K7EQM0 130 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms