RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 DAZ3Q9NR90 486 aaKnown RBP2.03□□□□□ -2.08
MDC1-208ENST00000494654 BEX4Q9NWD9 120 aaPredicted RBP2.03□□□□□ -2.08
MDC1-208ENST00000494654 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 C11orf21Q9P2W6 132 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 RNF7Q9UBF6 113 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 ATMQ13315 3056 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 MGAQ8IWI9 3026 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 PTPN13Q12923 2485 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 DOPEY1Q5JWR5 2465 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 PTPRQQ9UMZ3 2332 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 ANKRD17O75179 2603 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGLV11-55A0A075B6I3 123 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGLV3-9A0A075B6K5 115 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGHV4OR15-8A0A075B7B6 117 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 A0A087WW49 117 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 SMIM26A0A096LP01 95 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGHV3-21A0A0B4J1V1 117 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGHV1-3A0A0C4DH29 117 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 LY6G6EA0A0G2JKS1 128 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 RBMY1BA6NDE4 496 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 RBMY1EA6NEQ0 496 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 SPRY2O43597 315 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 LYZL6O75951 148 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGHG2P01859 326 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 MGPP08493 103 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 RBMY1DP0C7P1 496 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 RBMY1A1P0DJD3 496 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 RBMY1CP0DJD4 496 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGHV3-30-3P0DP02 117 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 RPL35AP18077 110 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 POLR2KP53803 58 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 TIRAPP58753 221 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 CFHR3Q02985 330 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 Q0VFX4 171 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 RBMY1FQ15415 496 aaKnown RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 C6orf226Q5I0X4 101 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 S100A7L2Q5SY68 101 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 GFRALQ6UXV0 394 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 C9orf47Q6ZRZ4 202 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 C9orf139Q6ZV77 190 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 C1orf158Q8N1D5 194 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 RNF182Q8N6D2 247 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 MBD3L2Q8NHZ7 208 aaPredicted RBP2.02□□□□□ -2.09
MDC1-208ENST00000494654 C10orf105Q8TEF2 133 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 EEF1AKMT3Q96AZ1 226 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 TMEM243Q9BU79 118 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 KRTAP4-7Q9BYR0 210 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 U3KQA8 63 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 MYO9AB2RTY4 2548 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 COL6A6A6NMZ7 2263 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 ITPR3Q14573 2671 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 CSMD1Q96PZ7 3565 aa2.02□□□□□ -2.09
MDC1-208ENST00000494654 IGLV4-3A0A075B6K6 122 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 TRAV21A0A0B4J279 112 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 TRBV27A0A0K0K1C4 114 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 FAM223BA6NKX1 122 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 H7BZZ5 65 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 M0R1W7 72 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 NDUFA1O15239 70 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 NBR2O15453 112 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 CCL3L1P16619 93 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 RPL39P62891 51 aaKnown RBP2.01□□□□□ -2.09
MDC1-208ENST00000494654 KLKP1Q107X0 134 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 CDSNQ15517 529 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 GPHB5Q86YW7 130 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 APRG1Q8IVJ8 170 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 LINC01561Q8N1V8 128 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 OBSCN-AS1Q96MR7 158 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 CCL13Q99616 98 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 SPRR3Q9UBC9 169 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 PKIGQ9Y2B9 76 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 UBE2D4Q9Y2X8 147 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 C22orf24Q9Y442 160 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 SMAD5-AS1Q9Y6J3 95 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 KIF25-AS1Q9Y6Z4 181 aa2.01□□□□□ -2.09
MDC1-208ENST00000494654 UBR5O95071 2799 aaPredicted RBP2.01□□□□□ -2.09
MDC1-208ENST00000494654 SPTAN1Q13813 2472 aaKnown RBP2□□□□□ -2.09
MDC1-208ENST00000494654 TRAV7A0A075B6U4 112 aa2□□□□□ -2.09
MDC1-208ENST00000494654 A0A087WVE0 104 aa2□□□□□ -2.09
MDC1-208ENST00000494654 PRAC2D3DTV9 90 aa2□□□□□ -2.09
MDC1-208ENST00000494654 VCYO14598 125 aa2□□□□□ -2.09
MDC1-208ENST00000494654 NDUFC1O43677 76 aa2□□□□□ -2.09
MDC1-208ENST00000494654 IGLV1-47P01700 117 aa2□□□□□ -2.09
MDC1-208ENST00000494654 IGHV1-46P01743 117 aa2□□□□□ -2.09
MDC1-208ENST00000494654 IGHV1-8P0DP01 117 aa2□□□□□ -2.09
MDC1-208ENST00000494654 EDN2P20800 178 aa2□□□□□ -2.09
MDC1-208ENST00000494654 LOXP28300 417 aaPredicted RBP2□□□□□ -2.09
MDC1-208ENST00000494654 XCL1P47992 114 aa2□□□□□ -2.09
MDC1-208ENST00000494654 LINC00315P59091 139 aa2□□□□□ -2.09
MDC1-208ENST00000494654 KLK9Q2XQG4 91 aa2□□□□□ -2.09
MDC1-208ENST00000494654 PRR9Q5T870 116 aa2□□□□□ -2.09
MDC1-208ENST00000494654 SUMO4Q6EEV6 95 aa2□□□□□ -2.09
MDC1-208ENST00000494654 FP248Q71RG6 208 aaPredicted RBP2□□□□□ -2.09
MDC1-208ENST00000494654 Q8N2B8 174 aa2□□□□□ -2.09
MDC1-208ENST00000494654 C20orf203Q8NBC4 194 aa2□□□□□ -2.09
MDC1-208ENST00000494654 MDS2Q8NDY4 140 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms