RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 IGKV3-7A0A075B6H7 116 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 IGKV2-40A0A087WW87 121 aaPredicted RBP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 A0A096LPI6 279 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 IGKV2D-40P01614 121 aaPredicted RBP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 HBDP02042 147 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 TCRAP04437 139 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 SAA1P0DJI8 122 aaPredicted RBP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 LSM3P62310 102 aaKnown RBP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 HSD17B12Q53GQ0 312 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 NABP2Q9BQ15 211 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 SORL1Q92673 2214 aa1.64□□□□□ -2.15
CMSS1-207ENST00000494412 MAP1AP78559 2803 aaPredicted RBP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 CHD3Q12873 2000 aaKnown RBP1.64□□□□□ -2.15
CMSS1-207ENST00000494412 TNRC6BQ9UPQ9 1833 aaKnown RBP1.63□□□□□ -2.15
CMSS1-207ENST00000494412 EML5Q05BV3 1969 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 TNRC6AQ8NDV7 1962 aaKnown RBP1.63□□□□□ -2.15
CMSS1-207ENST00000494412 LOC107984156A0A0G2JMH3 177 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 C3orf85A0A1B0GTC6 90 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 LOC107986453A0A1B0GWG9 222 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 TRBV6-4A0A1B0GX49 114 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
CMSS1-207ENST00000494412 H3BRM9 83 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 UQCRQO14949 82 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 DNAL4O96015 105 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 SLC25A5P05141 298 aaKnown RBP1.63□□□□□ -2.15
CMSS1-207ENST00000494412 SLC25A4P12235 298 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 CD52P31358 61 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 BLCAPP62952 87 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 SARNPP82979 210 aaKnown RBP1.63□□□□□ -2.15
CMSS1-207ENST00000494412 MIR22HGQ0VDD5 57 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 MPV17LQ2QL34 196 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 KRTAP26-1Q6PEX3 210 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 ARL17AQ8IVW1 177 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 PSMF1Q92530 271 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 SVEP1Q4LDE5 3571 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 KNTC1P50748 2209 aa1.63□□□□□ -2.15
CMSS1-207ENST00000494412 VWFP04275 2813 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 TRBV6-7A0A0A0MS04 114 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 COX7CP15954 63 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 PI4KAP42356 2102 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 SMIM21Q3B7S5 101 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 MORN2Q502X0 79 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 HAGHLQ6PII5 290 aaPredicted RBP1.62□□□□□ -2.15
CMSS1-207ENST00000494412 GLIPR1L1Q6UWM5 242 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 FOXI2Q6ZQN5 318 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 LINC00269Q8N2A0 174 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 DEFB119Q8N690 84 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 FAM107BQ9H098 131 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 BANF2Q9H503 90 aa1.62□□□□□ -2.15
CMSS1-207ENST00000494412 RYR2Q92736 4967 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 PRRC2CQ9Y520 2896 aaKnown RBP1.61□□□□□ -2.15
CMSS1-207ENST00000494412 SONP18583 2426 aaKnown RBP1.61□□□□□ -2.15
CMSS1-207ENST00000494412 LOC110117498A0A087WWA1 95 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 GEMIN2O14893 280 aaKnown RBP1.61□□□□□ -2.15
CMSS1-207ENST00000494412 CCL25O15444 150 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 NUPR1O60356 82 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 SMIM24O75264 130 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 ZNF25P17030 456 aaPredicted RBP1.61□□□□□ -2.15
CMSS1-207ENST00000494412 HIST1H1AQ02539 215 aaPredicted RBP1.61□□□□□ -2.15
CMSS1-207ENST00000494412 CASC2Q6XLA1 102 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 FAM19A2Q8N3H0 131 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 TSTD1Q8NFU3 115 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 OR10AG1Q8NH19 301 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 SMR3AQ99954 134 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 MYH1P12882 1939 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 DLG5Q8TDM6 1919 aa1.61□□□□□ -2.15
CMSS1-207ENST00000494412 PRKDCP78527 4128 aaKnown RBP1.61□□□□□ -2.15
CMSS1-207ENST00000494412 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 UNC13CQ8NB66 2214 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 M0R2N4 97 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 INE1O15225 51 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 HMGN1P05114 100 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 SPRNQ5BIV9 151 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 ZCCHC23Q6ZST2 131 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 OR4S1Q8NGB4 309 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 SMIM3Q9BZL3 60 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 TMEM14CQ9P0S9 112 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 COPZ2Q9P299 210 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 ZFP30Q9Y2G7 519 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 FOCADQ5VW36 1801 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 ESPL1Q14674 2120 aa1.6□□□□□ -2.15
CMSS1-207ENST00000494412 TENM3Q9P273 2699 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 ABCA4P78363 2273 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 PKDREJQ9NTG1 2253 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 PDCD11Q14690 1871 aaKnown RBP1.59□□□□□ -2.15
CMSS1-207ENST00000494412 KLF7O75840 302 aaPredicted RBP1.59□□□□□ -2.15
CMSS1-207ENST00000494412 COX4I1P13073 169 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 HIST1H1BP16401 226 aaKnown RBP1.59□□□□□ -2.15
CMSS1-207ENST00000494412 CKS2P33552 79 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 ETV6P41212 452 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 PCBD1P61457 104 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 C10orf105Q8TEF2 133 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 MAGOHBQ96A72 148 aaKnown RBP1.59□□□□□ -2.15
CMSS1-207ENST00000494412 TCEAL4Q96EI5 215 aa1.59□□□□□ -2.15
CMSS1-207ENST00000494412 HELZP42694 1942 aaKnown RBP1.59□□□□□ -2.15
CMSS1-207ENST00000494412 MYO18AQ92614 2054 aaKnown RBP1.59□□□□□ -2.16
CMSS1-207ENST00000494412 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms