RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 GAGE12GP0CL81 117 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 GAGE12IP0CL82 117 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 PMCHL1Q16048 86 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 Q8N8P6 123 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 C20orf78Q9BR46 151 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 KRTAP1-5Q9BYS1 174 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 AP5S1Q9NUS5 200 aa7.09□□□□□ -1.27
SOX2-OT-215ENST00000493521 TRGV2A0A075B6R0 118 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 TRAV4A0A0B4J268 109 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 IGHV1-24A0A0C4DH33 117 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 IGHV3-53P01767 116 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 Q6ZSN1 163 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 ZNF479Q96JC4 524 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 LINC00588Q9Y4M8 146 aa7.08□□□□□ -1.28
SOX2-OT-215ENST00000493521 TRBV6-5A0A0K0K1A5 114 aa7.07□□□□□ -1.28
SOX2-OT-215ENST00000493521 H7C1H1 209 aa7.07□□□□□ -1.28
SOX2-OT-215ENST00000493521 ZNRF2Q8NHG8 242 aa7.07□□□□□ -1.28
SOX2-OT-215ENST00000493521 NIT2Q9NQR4 276 aa7.07□□□□□ -1.28
SOX2-OT-215ENST00000493521 FAT1Q14517 4588 aa7.07□□□□□ -1.28
SOX2-OT-215ENST00000493521 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 F5H768 121 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 TCAPO15273 167 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 NUDT3O95989 172 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 FUSP35637 526 aaKnown RBP eCLIP7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 POLR2KP53803 58 aaKnown RBP7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 NEGR1Q7Z3B1 354 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 LINC00612Q8N6U2 182 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 TMEM70Q9BUB7 260 aa7.06□□□□□ -1.28
SOX2-OT-215ENST00000493521 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
SOX2-OT-215ENST00000493521 LYRM9A8MSI8 78 aa7.05□□□□□ -1.28
SOX2-OT-215ENST00000493521 RPL32P62910 135 aaKnown RBP7.05□□□□□ -1.28
SOX2-OT-215ENST00000493521 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
SOX2-OT-215ENST00000493521 A0A096LNJ9 63 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 A0A0J9YY99 117 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 VCYO14598 125 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 CIDEAO60543 219 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 LEPROTL1O95214 131 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 HBDP02042 147 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 LAGE3Q14657 143 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 C18orf15Q96N68 181 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 Q9UF83 564 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 TNFRSF18Q9Y5U5 241 aa7.04□□□□□ -1.28
SOX2-OT-215ENST00000493521 TRGV4A0A0C4DH28 118 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 K7EQD1 137 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 FCER1GP30273 86 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 KRTDAPP60985 99 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 FHL2Q14192 279 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 LINC00173Q6ZV60 143 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 SLC25A29Q8N8R3 303 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 DNAJC30Q96LL9 226 aa7.03□□□□□ -1.28
SOX2-OT-215ENST00000493521 TEX48A0A1B0GUV7 120 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 A6NJY4 79 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 I3L3M4 83 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 K7EMI3 77 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 C3orf79P0CE67 100 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 JOSD1Q15040 202 aaPredicted RBP7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 ORMDL2Q53FV1 153 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 C15orf53Q8NAA6 179 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 KIR2DL4Q99706 377 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 HSPB8Q9UJY1 196 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 HERC1Q15751 4861 aa7.02□□□□□ -1.29
SOX2-OT-215ENST00000493521 TRAV26-1A0A087WT03 109 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 TRBV10-1A0A0K0K1A3 114 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 TRBV6-4A0A1B0GX49 114 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 C16orf90A8MZG2 172 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 ATP5G1P05496 136 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 ESRGQ1W209 222 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 LINC00518Q8N0U6 118 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
SOX2-OT-215ENST00000493521 TRBV7-3A0A075B6L6 115 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 IGHV3-38A0A0C4DH36 116 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 LOC100131303A0A0U1RQF7 123 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 GAGE12JA6NER3 117 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 SCGB1D1O95968 90 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 TSHBP01222 138 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 RPL36AP83881 106 aaKnown RBP7□□□□□ -1.29
SOX2-OT-215ENST00000493521 GAGE1Q13065 139 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 GAGE4Q13068 117 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 GAGE5Q13069 117 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 RHOHQ15669 191 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 GAGE13Q4V321 117 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 RPL36ALQ969Q0 106 aaKnown RBP7□□□□□ -1.29
SOX2-OT-215ENST00000493521 MAP1LC3CQ9BXW4 147 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 HHLA3Q9XRX5 114 aa7□□□□□ -1.29
SOX2-OT-215ENST00000493521 CDPF1Q6NVV7 123 aa6.99□□□□□ -1.29
SOX2-OT-215ENST00000493521 C2orf66Q6UXQ4 117 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms