RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 GAGE13Q4V321 117 aa9.53□□□□□ -0.88
PTPRE-210ENST00000492479 DNAH7Q8WXX0 4024 aa9.53□□□□□ -0.88
PTPRE-210ENST00000492479 IGHV1-24A0A0C4DH33 117 aa9.52□□□□□ -0.89
PTPRE-210ENST00000492479 IFITM10A6NMD0 228 aa9.52□□□□□ -0.89
PTPRE-210ENST00000492479 COTL1Q14019 142 aa9.52□□□□□ -0.89
PTPRE-210ENST00000492479 ICOSQ9Y6W8 199 aa9.52□□□□□ -0.89
PTPRE-210ENST00000492479 DYNC2H1Q8NCM8 4307 aaKnown RBP9.52□□□□□ -0.89
PTPRE-210ENST00000492479 HBDP02042 147 aa9.51□□□□□ -0.89
PTPRE-210ENST00000492479 HTN3P15516 51 aa9.51□□□□□ -0.89
PTPRE-210ENST00000492479 PDZD11Q5EBL8 140 aa9.51□□□□□ -0.89
PTPRE-210ENST00000492479 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
PTPRE-210ENST00000492479 TMEM18Q96B42 140 aa9.51□□□□□ -0.89
PTPRE-210ENST00000492479 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
PTPRE-210ENST00000492479 A0A096LPF7 62 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 AMTP48728 403 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 CHCHD7Q9BUK0 85 aa9.5□□□□□ -0.89
PTPRE-210ENST00000492479 A0A0J9YY99 117 aa9.49□□□□□ -0.89
PTPRE-210ENST00000492479 H7C423 109 aa9.49□□□□□ -0.89
PTPRE-210ENST00000492479 NPSP0C0P6 89 aa9.49□□□□□ -0.89
PTPRE-210ENST00000492479 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
PTPRE-210ENST00000492479 PHLDA1Q8WV24 401 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-210ENST00000492479 TRBV6-8A0A0A6YYG3 113 aa9.48□□□□□ -0.89
PTPRE-210ENST00000492479 S100A2P29034 98 aa9.48□□□□□ -0.89
PTPRE-210ENST00000492479 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
PTPRE-210ENST00000492479 FAM19A2Q8N3H0 131 aa9.48□□□□□ -0.89
PTPRE-210ENST00000492479 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
PTPRE-210ENST00000492479 IGHV3-38A0A0C4DH36 116 aa9.47□□□□□ -0.89
PTPRE-210ENST00000492479 NUDT3O95989 172 aa9.47□□□□□ -0.89
PTPRE-210ENST00000492479 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
PTPRE-210ENST00000492479 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
PTPRE-210ENST00000492479 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.9
PTPRE-210ENST00000492479 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
PTPRE-210ENST00000492479 PMCHL1Q16048 86 aa9.46□□□□□ -0.9
PTPRE-210ENST00000492479 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.9
PTPRE-210ENST00000492479 TIMM17AQ99595 171 aa9.46□□□□□ -0.9
PTPRE-210ENST00000492479 HSPB8Q9UJY1 196 aa9.46□□□□□ -0.9
PTPRE-210ENST00000492479 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.9
PTPRE-210ENST00000492479 LOC105371267A0A1B0GV96 52 aa9.45□□□□□ -0.9
PTPRE-210ENST00000492479 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
PTPRE-210ENST00000492479 LELP1Q5T871 98 aa9.45□□□□□ -0.9
PTPRE-210ENST00000492479 ERASQ7Z444 233 aa9.45□□□□□ -0.9
PTPRE-210ENST00000492479 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
PTPRE-210ENST00000492479 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
PTPRE-210ENST00000492479 NUPR2A6NF83 97 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 ATP5LO75964 103 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 FABP4P15090 132 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
PTPRE-210ENST00000492479 TCTAP57738 103 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
PTPRE-210ENST00000492479 SPATA12Q7Z6I5 190 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
PTPRE-210ENST00000492479 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
PTPRE-210ENST00000492479 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
PTPRE-210ENST00000492479 ZNF25P17030 456 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-210ENST00000492479 PKIAP61925 76 aa9.42□□□□□ -0.9
PTPRE-210ENST00000492479 RPL39P62891 51 aaKnown RBP9.42□□□□□ -0.9
PTPRE-210ENST00000492479 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
PTPRE-210ENST00000492479 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
PTPRE-210ENST00000492479 A0A1B0GUV1 79 aa9.41□□□□□ -0.9
PTPRE-210ENST00000492479 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
PTPRE-210ENST00000492479 IFI27L1Q96BM0 104 aa9.41□□□□□ -0.9
PTPRE-210ENST00000492479 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
PTPRE-210ENST00000492479 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
PTPRE-210ENST00000492479 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-210ENST00000492479 IGKV2-29A2NJV5 120 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-210ENST00000492479 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-210ENST00000492479 FGF6P10767 208 aa9.4□□□□□ -0.9
PTPRE-210ENST00000492479 OR10D4PQ8NGN7 298 aa9.4□□□□□ -0.9
PTPRE-210ENST00000492479 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
PTPRE-210ENST00000492479 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
PTPRE-210ENST00000492479 TGP01266 2768 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 STARD9Q9P2P6 4700 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 TRAV12-1A0A0B4J245 112 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 ESRGQ1W209 222 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 AMELXQ99217 191 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 MAP1LC3CQ9BXW4 147 aa9.39□□□□□ -0.91
PTPRE-210ENST00000492479 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-210ENST00000492479 IGLL5B9A064 214 aa9.38□□□□□ -0.91
PTPRE-210ENST00000492479 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
PTPRE-210ENST00000492479 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
PTPRE-210ENST00000492479 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
PTPRE-210ENST00000492479 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
PTPRE-210ENST00000492479 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
PTPRE-210ENST00000492479 UBE2L6O14933 153 aa9.37□□□□□ -0.91
PTPRE-210ENST00000492479 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
PTPRE-210ENST00000492479 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
PTPRE-210ENST00000492479 CDC42SE2Q9NRR3 84 aa9.37□□□□□ -0.91
PTPRE-210ENST00000492479 MRPS16Q9Y3D3 137 aaKnown RBP9.37□□□□□ -0.91
PTPRE-210ENST00000492479 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
PTPRE-210ENST00000492479 AKR1D1P51857 326 aa9.36□□□□□ -0.91
PTPRE-210ENST00000492479 JOSD1Q15040 202 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms