RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 PTH2Q96A98 100 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 RNF183Q96D59 192 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 MAP6D1Q9H9H5 199 aa6.19□□□□□ -1.42
HPS4-215ENST00000491142 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 TCAPO15273 167 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 DLEU1O43261 78 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 PAX4O43316 350 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 IGKV3-20P01619 116 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 G0S2P27469 103 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 NANOS2P60321 138 aaKnown RBP6.18□□□□□ -1.42
HPS4-215ENST00000491142 PIK3CD-AS1Q5SR53 167 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 SUMO4Q6EEV6 95 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 TOMM6Q96B49 74 aa6.18□□□□□ -1.42
HPS4-215ENST00000491142 RPL39LQ96EH5 51 aaKnown RBP6.18□□□□□ -1.42
HPS4-215ENST00000491142 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 NUDT3O95989 172 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 RBMY1A1P0DJD3 496 aaKnown RBP6.17□□□□□ -1.42
HPS4-215ENST00000491142 RBMY1CP0DJD4 496 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 FGF6P10767 208 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 RPL35AP18077 110 aaKnown RBP6.17□□□□□ -1.42
HPS4-215ENST00000491142 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
HPS4-215ENST00000491142 RBMY1FQ15415 496 aaKnown RBP6.17□□□□□ -1.42
HPS4-215ENST00000491142 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 LINC00469Q8N7U9 141 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 C18orf15Q96N68 181 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 MDFICQ9P1T7 246 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 DKK2Q9UBU2 259 aa6.17□□□□□ -1.42
HPS4-215ENST00000491142 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 A0A087WX48 190 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.16□□□□□ -1.42
HPS4-215ENST00000491142 SIVA1O15304 175 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 DPM2O94777 84 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 IGKCP01834 107 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 CRYGDP07320 174 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 PRSS1P07477 247 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 LINC00336Q6ZUF6 198 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 BOD1L2Q8IYS8 172 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 STPG4Q8N801 248 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 KIR2DL5BQ8NHK3 375 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 C11orf45Q8TAV5 145 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 CSTL1Q9H114 145 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 JPT2Q9H910 190 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 APLNQ9ULZ1 77 aa6.16□□□□□ -1.42
HPS4-215ENST00000491142 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
HPS4-215ENST00000491142 CBY3A6NI87 242 aa6.15□□□□□ -1.42
HPS4-215ENST00000491142 VCYO14598 125 aa6.15□□□□□ -1.42
HPS4-215ENST00000491142 HINT1P49773 126 aaPredicted RBP6.15□□□□□ -1.42
HPS4-215ENST00000491142 CMC4P56277 68 aaPredicted RBP6.15□□□□□ -1.42
HPS4-215ENST00000491142 ZNF415Q09FC8 603 aa6.15□□□□□ -1.42
HPS4-215ENST00000491142 BATFQ16520 125 aa6.15□□□□□ -1.42
HPS4-215ENST00000491142 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.42
HPS4-215ENST00000491142 HHLA3Q9XRX5 114 aa6.15□□□□□ -1.42
HPS4-215ENST00000491142 NACAE9PAV3 2078 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 A0A087WWL8 130 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 IGLL5B9A064 214 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 F8VRH5 84 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 H7C1H1 209 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 M0QY20 66 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 DEFB4AO15263 64 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 INSP01308 110 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 PLNP26678 52 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 GAGE1Q13065 139 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 ODF3L2Q3SX64 289 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 ZNF876PQ49A33 203 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 MORN3Q6PF18 240 aaPredicted RBP6.14□□□□□ -1.43
HPS4-215ENST00000491142 C2orf66Q6UXQ4 117 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 ERASQ7Z444 233 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 NEXN-AS1Q8NBZ9 246 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 SCGB3A1Q96QR1 104 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 SPXQ9BT56 116 aa6.14□□□□□ -1.43
HPS4-215ENST00000491142 APOBP04114 4563 aaKnown RBP6.14□□□□□ -1.43
HPS4-215ENST00000491142 SDHAF1A6NFY7 115 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 PRSS29PA6NIE9 313 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 A8MWV9 139 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 F5H697 171 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 M0R2P5 195 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 TCTAP57738 103 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 RHOHQ15669 191 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 ZNF56Q15929 161 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 ZNF124Q15973 351 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 BVES-AS1Q5T3Y7 98 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 ZFP2Q6ZN57 461 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 TMEM141Q96I45 108 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 MRPL35Q9NZE8 188 aaKnown RBP6.13□□□□□ -1.43
HPS4-215ENST00000491142 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
HPS4-215ENST00000491142 RTL8CO15255 209 aa6.12□□□□□ -1.43
HPS4-215ENST00000491142 FAM74A4Q5TZK3 123 aa6.12□□□□□ -1.43
HPS4-215ENST00000491142 C11orf72Q8NBR9 251 aa6.12□□□□□ -1.43
HPS4-215ENST00000491142 OR11H2Q8NH07 326 aa6.12□□□□□ -1.43
HPS4-215ENST00000491142 BAALCQ8WXS3 180 aa6.12□□□□□ -1.43
HPS4-215ENST00000491142 TIMM17AQ99595 171 aa6.12□□□□□ -1.43
HPS4-215ENST00000491142 C11orf68Q9H3H3 251 aaKnown RBP6.12□□□□□ -1.43
HPS4-215ENST00000491142 HIGD1BQ9P298 99 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms