RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 METTL15A6NJ78 407 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 H3BPC8 53 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 ORM2P19652 201 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 ZNF93P35789 620 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-214ENST00000488427 HINT1P49773 126 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-214ENST00000488427 RPL30P62888 115 aaKnown RBP1.31□□□□□ -2.2
ITGB1-214ENST00000488427 SUPT4H1P63272 117 aaKnown RBP1.31□□□□□ -2.2
ITGB1-214ENST00000488427 SPAG11AQ6PDA7 123 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 FUNDC1Q8IVP5 155 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 OR8I2Q8N0Y5 310 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 TEX47Q8TBZ9 253 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 MRAP2Q96G30 205 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 PGLYRP3Q96LB9 341 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 NAA38Q9BRA0 125 aaKnown RBP1.31□□□□□ -2.2
ITGB1-214ENST00000488427 GINS4Q9BRT9 223 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 PARD6GQ9BYG4 376 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-214ENST00000488427 C8orf4Q9NR00 106 aa1.31□□□□□ -2.2
ITGB1-214ENST00000488427 IGKV2D-26A0A0A0MRZ7 120 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 MEIS3P1A6NDR6 274 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 CRYM-AS1A6NIL9 109 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 SNAPC5O75971 98 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 NQO2P16083 231 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 UBE2D3P61077 147 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 YPEL3P61236 119 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-214ENST00000488427 QRFPP83859 136 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 FLOT2Q14254 428 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 C9orf116Q5BN46 136 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-214ENST00000488427 C1orf194Q5T5A4 169 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 KRTAP26-1Q6PEX3 210 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 C6orf201Q7Z4U5 140 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 FAM19A3Q7Z5A8 133 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 PBDC1Q9BVG4 233 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 C20orf27Q9GZN8 174 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 TAS2R8Q9NYW2 309 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 MRPL36Q9P0J6 103 aaKnown RBP1.3□□□□□ -2.2
ITGB1-214ENST00000488427 GNG8Q9UK08 70 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 ARL2BPQ9Y2Y0 163 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 RBMX2Q9Y388 322 aaKnown RBP1.3□□□□□ -2.2
ITGB1-214ENST00000488427 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
ITGB1-214ENST00000488427 TRBV6-4A0A1B0GX49 114 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 TMEM262E9PQX1 116 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 CORTO00230 105 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 IGLC1P0CG04 106 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 OR10J1P30954 320 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 PPP3R1P63098 170 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 ERHP84090 104 aaKnown RBP1.29□□□□□ -2.2
ITGB1-214ENST00000488427 ZNF90Q03938 601 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 MRPL51Q4U2R6 128 aaKnown RBP1.29□□□□□ -2.2
ITGB1-214ENST00000488427 CLPSL2Q6UWE3 100 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 GLIPR1L1Q6UWM5 242 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 FAM19A2Q8N3H0 131 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 TAS2R4Q9NYW5 299 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 TMEM56-RWDD3S4R434 201 aa1.29□□□□□ -2.2
ITGB1-214ENST00000488427 TRBV6-7A0A0A0MS04 114 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 C20orf202A1L168 122 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 C7orf71A4D174 169 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 TNFAIP8O95379 198 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 HMGN1P05114 100 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 RPSAP08865 295 aaKnown RBP1.28□□□□□ -2.2
ITGB1-214ENST00000488427 RD3LP0DJH9 198 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 GADD45AP24522 165 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 SNCAP37840 140 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 FAM229BQ4G0N7 80 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 AADACL3Q5VUY0 350 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 RASL11AQ6T310 242 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 MNS1Q8NEH6 495 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 OR8J3Q8NGG0 315 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 ZNF431Q8TF32 576 aaPredicted RBP1.28□□□□□ -2.2
ITGB1-214ENST00000488427 ZNF625Q96I27 306 aaPredicted RBP1.28□□□□□ -2.2
ITGB1-214ENST00000488427 SLC39A9Q9NUM3 307 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 UQCC1Q9NVA1 299 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 FKBP11Q9NYL4 201 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 AK3Q9UIJ7 227 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 PRNDQ9UKY0 176 aa1.28□□□□□ -2.2
ITGB1-214ENST00000488427 SLC25A5P05141 298 aaKnown RBP1.27□□□□□ -2.21
ITGB1-214ENST00000488427 CD2P06729 351 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 FGF6P10767 208 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 UBE2BP63146 152 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 STX3Q13277 289 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 HSP90B2PQ58FF3 399 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 CCDC124Q96CT7 223 aaKnown RBP1.27□□□□□ -2.21
ITGB1-214ENST00000488427 ARHGAP5-AS1Q96IT6 56 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 CARD19Q96LW7 228 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 ODF3Q96PU9 254 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 CMSS1Q9BQ75 279 aaKnown RBP1.27□□□□□ -2.21
ITGB1-214ENST00000488427 IFT46Q9NQC8 304 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 PLEKHJ1Q9NW61 149 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 SSR3Q9UNL2 185 aa1.27□□□□□ -2.21
ITGB1-214ENST00000488427 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
ITGB1-214ENST00000488427 A0A0G2JQZ4 141 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 LOC107984640A0A0U1RRK4 108 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 LINC00854A0A1B0GVQ3 168 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 LINC00862A6NCI5 91 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 FAM24AA6NFZ4 105 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 C9orf92A6NGG3 77 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 J3QQQ9 107 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 LINC00694P0DN24 101 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 MGST1P10620 155 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 1876.9 ms