RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 RASL11AQ6T310 242 aa10.49□□□□□ -0.73
HMGN1-212ENST00000479586 COTL1Q14019 142 aa10.48□□□□□ -0.73
HMGN1-212ENST00000479586 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
HMGN1-212ENST00000479586 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
HMGN1-212ENST00000479586 FER1L6-AS1Q8NA97 138 aa10.47□□□□□ -0.73
HMGN1-212ENST00000479586 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
HMGN1-212ENST00000479586 TCEAL7Q9BRU2 100 aa10.47□□□□□ -0.73
HMGN1-212ENST00000479586 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
HMGN1-212ENST00000479586 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
HMGN1-212ENST00000479586 XCL1P47992 114 aa10.46□□□□□ -0.73
HMGN1-212ENST00000479586 SYCNQ0VAF6 134 aa10.46□□□□□ -0.73
HMGN1-212ENST00000479586 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
HMGN1-212ENST00000479586 MARVELD1Q9BSK0 173 aa10.46□□□□□ -0.73
HMGN1-212ENST00000479586 TPPP3Q9BW30 176 aa10.46□□□□□ -0.73
HMGN1-212ENST00000479586 NIT2Q9NQR4 276 aa10.46□□□□□ -0.73
HMGN1-212ENST00000479586 FSIP2Q5CZC0 6907 aa10.46□□□□□ -0.74
HMGN1-212ENST00000479586 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
HMGN1-212ENST00000479586 FHITP49789 147 aa10.45□□□□□ -0.74
HMGN1-212ENST00000479586 AMMECR1LQ6DCA0 310 aa10.45□□□□□ -0.74
HMGN1-212ENST00000479586 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
HMGN1-212ENST00000479586 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
HMGN1-212ENST00000479586 MED28Q9H204 178 aa10.45□□□□□ -0.74
HMGN1-212ENST00000479586 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
HMGN1-212ENST00000479586 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-212ENST00000479586 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
HMGN1-212ENST00000479586 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
HMGN1-212ENST00000479586 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
HMGN1-212ENST00000479586 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-212ENST00000479586 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-212ENST00000479586 H0Y9J4 135 aa10.43□□□□□ -0.74
HMGN1-212ENST00000479586 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
HMGN1-212ENST00000479586 IFITM3Q01628 133 aa10.43□□□□□ -0.74
HMGN1-212ENST00000479586 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 CCL25O15444 150 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 UPK1BO75841 260 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 BCL2P10415 239 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 AKR1C8PQ5T2L2 129 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 Q6ZNX1 250 aa10.42□□□□□ -0.74
HMGN1-212ENST00000479586 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
HMGN1-212ENST00000479586 PAGE4O60829 102 aa10.41□□□□□ -0.74
HMGN1-212ENST00000479586 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
HMGN1-212ENST00000479586 NTF3P20783 257 aa10.41□□□□□ -0.74
HMGN1-212ENST00000479586 CAMPP49913 170 aa10.41□□□□□ -0.74
HMGN1-212ENST00000479586 OR5A1Q8NGJ0 315 aa10.41□□□□□ -0.74
HMGN1-212ENST00000479586 FGF6P10767 208 aa10.4□□□□□ -0.74
HMGN1-212ENST00000479586 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
HMGN1-212ENST00000479586 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
HMGN1-212ENST00000479586 IGLV4-69A0A075B6H9 119 aa10.38□□□□□ -0.75
HMGN1-212ENST00000479586 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
HMGN1-212ENST00000479586 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-212ENST00000479586 UBE2D1P51668 147 aa10.37□□□□□ -0.75
HMGN1-212ENST00000479586 MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-212ENST00000479586 Q5BKY6 102 aa10.37□□□□□ -0.75
HMGN1-212ENST00000479586 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
HMGN1-212ENST00000479586 ISOC2Q96AB3 205 aa10.37□□□□□ -0.75
HMGN1-212ENST00000479586 H7C423 109 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 APOMO95445 188 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 APCSP02743 223 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 DEFA1P59665 94 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 EIF5AP63241 154 aaKnown RBP10.36□□□□□ -0.75
HMGN1-212ENST00000479586 RPL18AQ02543 176 aaKnown RBP10.36□□□□□ -0.75
HMGN1-212ENST00000479586 OR2D3Q8NGH3 330 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 S100ZQ8WXG8 99 aa10.36□□□□□ -0.75
HMGN1-212ENST00000479586 A0A087WZ39 114 aa10.35□□□□□ -0.75
HMGN1-212ENST00000479586 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
HMGN1-212ENST00000479586 NCR2O95944 276 aa10.35□□□□□ -0.75
HMGN1-212ENST00000479586 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
HMGN1-212ENST00000479586 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-212ENST00000479586 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
HMGN1-212ENST00000479586 MUC17Q685J3 4493 aa10.34□□□□□ -0.75
HMGN1-212ENST00000479586 TSPAN13O95857 204 aa10.33□□□□□ -0.76
HMGN1-212ENST00000479586 RPL13AP40429 203 aaKnown RBP10.33□□□□□ -0.76
HMGN1-212ENST00000479586 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
HMGN1-212ENST00000479586 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
HMGN1-212ENST00000479586 LINC00299Q6ZSB3 139 aa10.33□□□□□ -0.76
HMGN1-212ENST00000479586 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
HMGN1-212ENST00000479586 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
HMGN1-212ENST00000479586 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
HMGN1-212ENST00000479586 A0A1B0GV50 99 aa10.32□□□□□ -0.76
HMGN1-212ENST00000479586 PFDN1O60925 122 aa10.32□□□□□ -0.76
HMGN1-212ENST00000479586 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
HMGN1-212ENST00000479586 SS18Q15532 418 aa10.32□□□□□ -0.76
HMGN1-212ENST00000479586 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
HMGN1-212ENST00000479586 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
HMGN1-212ENST00000479586 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-212ENST00000479586 ALG5Q9Y673 324 aa10.32□□□□□ -0.76
HMGN1-212ENST00000479586 F2Z2F3 143 aa10.31□□□□□ -0.76
HMGN1-212ENST00000479586 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
HMGN1-212ENST00000479586 C19orf71A6NCJ1 209 aa10.3□□□□□ -0.76
HMGN1-212ENST00000479586 FXYD6-FXYD2A0A087WZ82 144 aa10.29□□□□□ -0.76
HMGN1-212ENST00000479586 BCL2L11O43521 198 aa10.29□□□□□ -0.76
HMGN1-212ENST00000479586 MALP21145 153 aa10.29□□□□□ -0.76
HMGN1-212ENST00000479586 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
HMGN1-212ENST00000479586 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
HMGN1-212ENST00000479586 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
HMGN1-212ENST00000479586 CRCT1Q9UGL9 99 aa10.28□□□□□ -0.76
HMGN1-212ENST00000479586 COX7A2LO14548 114 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms