RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 DAZ3Q9NR90 486 aaKnown RBP13.37□□□□□ -0.27
SMARCD3-209ENST00000472988 LOC105371267A0A1B0GV96 52 aa13.37□□□□□ -0.27
SMARCD3-209ENST00000472988 FABP4P15090 132 aa13.37□□□□□ -0.27
SMARCD3-209ENST00000472988 FCER1GP30273 86 aa13.37□□□□□ -0.27
SMARCD3-209ENST00000472988 ORMDL2Q53FV1 153 aa13.37□□□□□ -0.27
SMARCD3-209ENST00000472988 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
SMARCD3-209ENST00000472988 NUDT3O95989 172 aa13.36□□□□□ -0.27
SMARCD3-209ENST00000472988 HBDP02042 147 aa13.36□□□□□ -0.27
SMARCD3-209ENST00000472988 COTL1Q14019 142 aa13.35□□□□□ -0.27
SMARCD3-209ENST00000472988 STAB2Q8WWQ8 2551 aa13.35□□□□□ -0.27
SMARCD3-209ENST00000472988 TRAV10A0A0B4J240 114 aa13.34□□□□□ -0.27
SMARCD3-209ENST00000472988 BTF3P20290 206 aaKnown RBP13.34□□□□□ -0.27
SMARCD3-209ENST00000472988 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
SMARCD3-209ENST00000472988 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
SMARCD3-209ENST00000472988 A0A096LPF7 62 aa13.34□□□□□ -0.27
SMARCD3-209ENST00000472988 ATP6V0E2Q8NHE4 81 aa13.33□□□□□ -0.28
SMARCD3-209ENST00000472988 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.28
SMARCD3-209ENST00000472988 ICOSQ9Y6W8 199 aa13.33□□□□□ -0.28
SMARCD3-209ENST00000472988 H3BNG1 76 aa13.32□□□□□ -0.28
SMARCD3-209ENST00000472988 C2orf66Q6UXQ4 117 aa13.32□□□□□ -0.28
SMARCD3-209ENST00000472988 LINC00173Q6ZV60 143 aa13.32□□□□□ -0.28
SMARCD3-209ENST00000472988 FBN3Q75N90 2809 aa13.32□□□□□ -0.28
SMARCD3-209ENST00000472988 MRPL23Q16540 153 aaKnown RBP13.31□□□□□ -0.28
SMARCD3-209ENST00000472988 LEPROTL1O95214 131 aa13.31□□□□□ -0.28
SMARCD3-209ENST00000472988 RPL39P62891 51 aaKnown RBP13.31□□□□□ -0.28
SMARCD3-209ENST00000472988 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
SMARCD3-209ENST00000472988 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
SMARCD3-209ENST00000472988 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
SMARCD3-209ENST00000472988 OR10D4PQ8NGN7 298 aa13.29□□□□□ -0.28
SMARCD3-209ENST00000472988 CYSLTR1Q9Y271 337 aa13.29□□□□□ -0.28
SMARCD3-209ENST00000472988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
SMARCD3-209ENST00000472988 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
SMARCD3-209ENST00000472988 TRBV6-8A0A0A6YYG3 113 aa13.27□□□□□ -0.29
SMARCD3-209ENST00000472988 G0S2P27469 103 aa13.27□□□□□ -0.29
SMARCD3-209ENST00000472988 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
SMARCD3-209ENST00000472988 TMEM97Q5BJF2 176 aa13.26□□□□□ -0.29
SMARCD3-209ENST00000472988 SH2D6Q7Z4S9 175 aa13.26□□□□□ -0.29
SMARCD3-209ENST00000472988 TRBV25-1A0A075B6N4 114 aa13.25□□□□□ -0.29
SMARCD3-209ENST00000472988 AKR1D1P51857 326 aa13.25□□□□□ -0.29
SMARCD3-209ENST00000472988 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
SMARCD3-209ENST00000472988 SCGB3A1Q96QR1 104 aa13.24□□□□□ -0.29
SMARCD3-209ENST00000472988 TMEM243Q9BU79 118 aa13.24□□□□□ -0.29
SMARCD3-209ENST00000472988 IGIPA6NJ69 53 aa13.24□□□□□ -0.29
SMARCD3-209ENST00000472988 C3orf79P0CE67 100 aa13.24□□□□□ -0.29
SMARCD3-209ENST00000472988 KRTDAPP60985 99 aa13.24□□□□□ -0.29
SMARCD3-209ENST00000472988 ERASQ7Z444 233 aa13.23□□□□□ -0.29
SMARCD3-209ENST00000472988 UBE2D4Q9Y2X8 147 aa13.23□□□□□ -0.29
SMARCD3-209ENST00000472988 LINC01549A6NIU2 74 aa13.22□□□□□ -0.29
SMARCD3-209ENST00000472988 ATP5LO75964 103 aa13.22□□□□□ -0.29
SMARCD3-209ENST00000472988 CEMP1Q6PRD7 247 aaPredicted RBP13.22□□□□□ -0.29
SMARCD3-209ENST00000472988 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
SMARCD3-209ENST00000472988 IGLL5B9A064 214 aa13.21□□□□□ -0.29
SMARCD3-209ENST00000472988 C15orf53Q8NAA6 179 aa13.21□□□□□ -0.29
SMARCD3-209ENST00000472988 TIMM17AQ99595 171 aa13.21□□□□□ -0.29
SMARCD3-209ENST00000472988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.21□□□□□ -0.3
SMARCD3-209ENST00000472988 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.3
SMARCD3-209ENST00000472988 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.3
SMARCD3-209ENST00000472988 UBE2L6O14933 153 aa13.2□□□□□ -0.3
SMARCD3-209ENST00000472988 FGF6P10767 208 aa13.2□□□□□ -0.3
SMARCD3-209ENST00000472988 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
SMARCD3-209ENST00000472988 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
SMARCD3-209ENST00000472988 CHCHD5Q9BSY4 110 aa13.2□□□□□ -0.3
SMARCD3-209ENST00000472988 H0Y8G0 127 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 SYS1-DBNDD2H3BUS1 97 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 TIRAPP58753 221 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 GAGE6Q13070 117 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 LELP1Q5T871 98 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 SPANXA1Q9NS26 97 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 PYGO1Q9Y3Y4 419 aa13.19□□□□□ -0.3
SMARCD3-209ENST00000472988 H7C423 109 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 ESRGQ1W209 222 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 MRPL52Q86TS9 123 aaKnown RBP13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 Q8N976 141 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 TMEM141Q96I45 108 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 TIMM21Q9BVV7 248 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 DNAH7Q8WXX0 4024 aa13.18□□□□□ -0.3
SMARCD3-209ENST00000472988 ZC2HC1BQ5TFG8 222 aa13.17□□□□□ -0.3
SMARCD3-209ENST00000472988 Q6ZN92 141 aa13.17□□□□□ -0.3
SMARCD3-209ENST00000472988 Q6ZUT4 128 aa13.17□□□□□ -0.3
SMARCD3-209ENST00000472988 PYY3Q5JQD4 70 aa13.16□□□□□ -0.3
SMARCD3-209ENST00000472988 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
SMARCD3-209ENST00000472988 PRSS1P07477 247 aa13.15□□□□□ -0.3
SMARCD3-209ENST00000472988 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
SMARCD3-209ENST00000472988 AMMECR1LQ6DCA0 310 aa13.15□□□□□ -0.3
SMARCD3-209ENST00000472988 CSDC2Q9Y534 153 aaKnown RBP13.15□□□□□ -0.3
SMARCD3-209ENST00000472988 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
SMARCD3-209ENST00000472988 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.31
SMARCD3-209ENST00000472988 PET117Q6UWS5 81 aa13.15□□□□□ -0.31
SMARCD3-209ENST00000472988 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
SMARCD3-209ENST00000472988 NPSP0C0P6 89 aa13.14□□□□□ -0.31
SMARCD3-209ENST00000472988 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
SMARCD3-209ENST00000472988 Q8N3U1 123 aa13.14□□□□□ -0.31
SMARCD3-209ENST00000472988 IGLV4-60A0A075B6I1 120 aa13.13□□□□□ -0.31
SMARCD3-209ENST00000472988 ZNF25P17030 456 aaPredicted RBP13.13□□□□□ -0.31
SMARCD3-209ENST00000472988 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
SMARCD3-209ENST00000472988 LINC01545Q5VT33 79 aa13.13□□□□□ -0.31
SMARCD3-209ENST00000472988 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
SMARCD3-209ENST00000472988 OR5A1Q8NGJ0 315 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms