RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RPS10P46783 165 aaKnown RBP5.76□□□□□ -1.49
VCL-204ENST00000472585 FHITP49789 147 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 UBE2G1P62253 170 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 HIGD2BQ4VC39 106 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 TMEM97Q5BJF2 176 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 STPG4Q8N801 248 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.76□□□□□ -1.49
VCL-204ENST00000472585 FAM231BA6NCW3 169 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 H7C1H1 209 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 NDUFS6O75380 124 aaKnown RBP5.75□□□□□ -1.49
VCL-204ENST00000472585 CXCL1P09341 107 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 NKX2-5P52952 324 aaPredicted RBP5.75□□□□□ -1.49
VCL-204ENST00000472585 SPANXN1Q5VSR9 72 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 CYTL1Q9NRR1 136 aa5.75□□□□□ -1.49
VCL-204ENST00000472585 MAP1LC3B2A6NCE7 125 aa5.74□□□□□ -1.49
VCL-204ENST00000472585 G3V3Q6 166 aa5.74□□□□□ -1.49
VCL-204ENST00000472585 PAGE4O60829 102 aa5.74□□□□□ -1.49
VCL-204ENST00000472585 GZMBP10144 247 aa5.74□□□□□ -1.49
VCL-204ENST00000472585 CST9LP1Q5W188 147 aa5.74□□□□□ -1.49
VCL-204ENST00000472585 MAP1LC3BQ9GZQ8 125 aa5.74□□□□□ -1.49
VCL-204ENST00000472585 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
VCL-204ENST00000472585 IGLC6P0CF74 106 aa5.73□□□□□ -1.49
VCL-204ENST00000472585 AKR1C3P42330 323 aa5.73□□□□□ -1.49
VCL-204ENST00000472585 BAGE2Q86Y30 109 aa5.73□□□□□ -1.49
VCL-204ENST00000472585 LINC00526Q96FQ7 95 aa5.73□□□□□ -1.49
VCL-204ENST00000472585 TMEM243Q9BU79 118 aa5.73□□□□□ -1.49
VCL-204ENST00000472585 TRAV26-2A0A0B4J265 109 aa5.72□□□□□ -1.49
VCL-204ENST00000472585 IGKV3OR2-268A0A0C4DH90 116 aa5.72□□□□□ -1.49
VCL-204ENST00000472585 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
VCL-204ENST00000472585 MGPP08493 103 aa5.72□□□□□ -1.49
VCL-204ENST00000472585 Q6ZRP5 223 aa5.72□□□□□ -1.49
VCL-204ENST00000472585 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
VCL-204ENST00000472585 FOXI1Q12951 378 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 AKR1C8PQ5T2L2 129 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 TMUB2Q71RG4 321 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 ZNF664Q8N3J9 261 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 CHCHD10Q8WYQ3 142 aaPredicted RBP5.71□□□□□ -1.5
VCL-204ENST00000472585 PGLYRP4Q96LB8 373 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 TCEAL7Q9BRU2 100 aa5.71□□□□□ -1.5
VCL-204ENST00000472585 BORCS7-ASMTA0A0B4J1R7 106 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 A0A1B0GV50 99 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 SMIM17P0DL12 118 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 SULT1A2P50226 295 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 PRR4Q16378 134 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 RASL11AQ6T310 242 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 STOML3Q8TAV4 291 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 MBD3L1Q8WWY6 194 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 NIT2Q9NQR4 276 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
VCL-204ENST00000472585 FXYD6-FXYD2A0A087WZ82 144 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 GIPP09681 153 aaPredicted RBP5.69□□□□□ -1.5
VCL-204ENST00000472585 CACNG7P62955 275 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 CFAP161Q6P656 301 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 Q6ZNX1 250 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 MED28Q9H204 178 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
VCL-204ENST00000472585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
VCL-204ENST00000472585 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
VCL-204ENST00000472585 C19orf71A6NCJ1 209 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 S100A9P06702 114 aaKnown RBP5.68□□□□□ -1.5
VCL-204ENST00000472585 RPL35P42766 123 aaKnown RBP5.68□□□□□ -1.5
VCL-204ENST00000472585 AMTP48728 403 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 DEFA1P59665 94 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 CCL20P78556 96 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 FER1L6-AS1Q8NA97 138 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 GATD1Q8NB37 220 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 SFT2D1Q8WV19 159 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 TPPP3Q9BW30 176 aa5.68□□□□□ -1.5
VCL-204ENST00000472585 UBE2L6O14933 153 aa5.67□□□□□ -1.5
VCL-204ENST00000472585 NTF3P20783 257 aa5.67□□□□□ -1.5
VCL-204ENST00000472585 LYZL1Q6UWQ5 148 aa5.67□□□□□ -1.5
VCL-204ENST00000472585 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
VCL-204ENST00000472585 OR2D3Q8NGH3 330 aa5.67□□□□□ -1.5
VCL-204ENST00000472585 RPL39LQ96EH5 51 aaKnown RBP5.67□□□□□ -1.5
VCL-204ENST00000472585 RAB19A4D1S5 217 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 ZNF561-AS1K7EIQ3 104 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 FOXA3P55318 350 aaPredicted RBP5.66□□□□□ -1.5
VCL-204ENST00000472585 COTL1Q14019 142 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 KRTAP11-1Q8IUC1 163 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 PKIGQ9Y2B9 76 aa5.66□□□□□ -1.5
VCL-204ENST00000472585 TRBV20OR9-2A0A075B6H5 130 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 SMLR1H3BR10 107 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 ARPC5O15511 151 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 FGF6P10767 208 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 XCL1P47992 114 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 PTTG1IPP53801 180 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 FAM213BQ8TBF2 198 aa5.65□□□□□ -1.5
VCL-204ENST00000472585 CCL25O15444 150 aa5.64□□□□□ -1.51
VCL-204ENST00000472585 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
VCL-204ENST00000472585 CENPWQ5EE01 88 aa5.64□□□□□ -1.51
VCL-204ENST00000472585 RNASEKQ6P5S7 137 aaKnown RBP5.64□□□□□ -1.51
VCL-204ENST00000472585 C9orf62Q8N4C0 152 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms