RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
CDHR3-209ENST00000472116 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
CDHR3-209ENST00000472116 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
CDHR3-209ENST00000472116 C11orf1Q9H5F2 150 aa6.03□□□□□ -1.44
CDHR3-209ENST00000472116 TMSB15BA0A087X1C1 80 aa6.02□□□□□ -1.45
CDHR3-209ENST00000472116 NDUFB6O95139 128 aa6.02□□□□□ -1.45
CDHR3-209ENST00000472116 BTCP35070 178 aa6.02□□□□□ -1.45
CDHR3-209ENST00000472116 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
CDHR3-209ENST00000472116 MARVELD1Q9BSK0 173 aa6.02□□□□□ -1.45
CDHR3-209ENST00000472116 ZNF471Q9BX82 626 aaPredicted RBP6.02□□□□□ -1.45
CDHR3-209ENST00000472116 FLVCR2Q9UPI3 526 aa6.02□□□□□ -1.45
CDHR3-209ENST00000472116 BCL2P10415 239 aa6.01□□□□□ -1.45
CDHR3-209ENST00000472116 CAMPP49913 170 aa6.01□□□□□ -1.45
CDHR3-209ENST00000472116 NHLH2Q02577 135 aa6.01□□□□□ -1.45
CDHR3-209ENST00000472116 AMMECR1LQ6DCA0 310 aa6.01□□□□□ -1.45
CDHR3-209ENST00000472116 NUDT15Q9NV35 164 aa6.01□□□□□ -1.45
CDHR3-209ENST00000472116 ARL2-SNX15V9GYD0 113 aa6.01□□□□□ -1.45
CDHR3-209ENST00000472116 INMT-MINDY4F8WBC2 141 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 APOMO95445 188 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 SUMO1P63165 101 aaKnown RBP6□□□□□ -1.45
CDHR3-209ENST00000472116 RAB32Q13637 225 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 Q6ZNX1 250 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 LINC00173Q6ZV60 143 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 SCGB1C1Q8TD33 95 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 EPDR1Q9UM22 224 aa6□□□□□ -1.45
CDHR3-209ENST00000472116 TRAV34A0A0B4J273 112 aa5.99□□□□□ -1.45
CDHR3-209ENST00000472116 SH2D1AO60880 128 aa5.99□□□□□ -1.45
CDHR3-209ENST00000472116 XCL1P47992 114 aa5.99□□□□□ -1.45
CDHR3-209ENST00000472116 UBE2BP63146 152 aa5.99□□□□□ -1.45
CDHR3-209ENST00000472116 FOXI1Q12951 378 aa5.99□□□□□ -1.45
CDHR3-209ENST00000472116 SPANXN1Q5VSR9 72 aa5.99□□□□□ -1.45
CDHR3-209ENST00000472116 RPP21Q9H633 154 aaKnown RBP5.99□□□□□ -1.45
CDHR3-209ENST00000472116 IGLV4-69A0A075B6H9 119 aa5.98□□□□□ -1.45
CDHR3-209ENST00000472116 HMGB3O15347 200 aaKnown RBP5.98□□□□□ -1.45
CDHR3-209ENST00000472116 ARL14EPLP0DKL9 152 aa5.98□□□□□ -1.45
CDHR3-209ENST00000472116 RPL12P30050 165 aaKnown RBP5.98□□□□□ -1.45
CDHR3-209ENST00000472116 COTL1Q14019 142 aa5.98□□□□□ -1.45
CDHR3-209ENST00000472116 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
CDHR3-209ENST00000472116 MED28Q9H204 178 aa5.98□□□□□ -1.45
CDHR3-209ENST00000472116 MGPP08493 103 aa5.97□□□□□ -1.45
CDHR3-209ENST00000472116 NKX2-5P52952 324 aaPredicted RBP5.97□□□□□ -1.45
CDHR3-209ENST00000472116 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
CDHR3-209ENST00000472116 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
CDHR3-209ENST00000472116 RNASEKQ6P5S7 137 aaKnown RBP5.97□□□□□ -1.45
CDHR3-209ENST00000472116 OR10AG1Q8NH19 301 aa5.97□□□□□ -1.45
CDHR3-209ENST00000472116 PGLYRP4Q96LB8 373 aa5.97□□□□□ -1.45
CDHR3-209ENST00000472116 AP1S3Q96PC3 154 aa5.97□□□□□ -1.45
CDHR3-209ENST00000472116 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
CDHR3-209ENST00000472116 H3BS24 57 aa5.96□□□□□ -1.46
CDHR3-209ENST00000472116 Q86TA4 180 aa5.96□□□□□ -1.46
CDHR3-209ENST00000472116 CCL25O15444 150 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 MALP21145 153 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 CDC34P49427 236 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-209ENST00000472116 CRIP1P50238 77 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 NUP35Q8NFH5 326 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 OR5A1Q8NGJ0 315 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 TMEM167BQ9NRX6 74 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 ALG5Q9Y673 324 aa5.95□□□□□ -1.46
CDHR3-209ENST00000472116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-209ENST00000472116 SSNA1O43805 119 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 ZNF861PO60384 105 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 GCHFRP30047 84 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 SSTP61278 116 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 MEF2BQ02080 365 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-209ENST00000472116 SS18Q15532 418 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 FAM19A5Q7Z5A7 132 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-209ENST00000472116 BTF3L4Q96K17 158 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 ZFP30Q9Y2G7 519 aa5.94□□□□□ -1.46
CDHR3-209ENST00000472116 A0A087X002 238 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 C19orf71A6NCJ1 209 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 M0QY20 66 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 TSHBP01222 138 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 UBE2G1P62253 170 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 LRRC37A5PQ49AS3 106 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
CDHR3-209ENST00000472116 hCG_2014768A0A024R1R8 64 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 MUC21A0A140T8X8 626 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 A0A1B0GVG6 124 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 M0QXV9 152 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 PEX7O00628 323 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 PFDN1O60925 122 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 STAG3L2P0CL84 134 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 STAG3L3P0CL85 134 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 SUMO4Q6EEV6 95 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 RASL11AQ6T310 242 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 TMEM101Q96IK0 257 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 SEC22CQ9BRL7 303 aa5.92□□□□□ -1.46
CDHR3-209ENST00000472116 LINC00959A0A1B0GUT2 108 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 FAM168BA1KXE4 195 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 IL15RAQ13261 267 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 CD164L2Q6UWJ8 174 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 AKAP14Q86UN6 197 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 C2orf48Q96LS8 159 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 IMMP2LQ96T52 175 aa5.91□□□□□ -1.46
CDHR3-209ENST00000472116 OPRPNQ99935 248 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-209ENST00000472116 A0A1W2PRE2 83 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 H7C423 109 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms