RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 UPK1BO75841 260 aa11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 MT-ND6P03923 174 aa11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 PRR4Q16378 134 aa11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 RPL7L1Q6DKI1 246 aaKnown RBP11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 PGLYRP4Q96LB8 373 aa11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 FHITP49789 147 aa11.62□□□□□ -0.55
NCKIPSD-209ENST00000470006 RNASEKQ6P5S7 137 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-209ENST00000470006 BAGE2Q86Y30 109 aa11.62□□□□□ -0.55
NCKIPSD-209ENST00000470006 PRR26Q8N8Z3 221 aa11.62□□□□□ -0.55
NCKIPSD-209ENST00000470006 S100A9P06702 114 aaKnown RBP11.61□□□□□ -0.55
NCKIPSD-209ENST00000470006 GAGE2BQ13066 116 aa11.61□□□□□ -0.55
NCKIPSD-209ENST00000470006 NIT2Q9NQR4 276 aa11.61□□□□□ -0.55
NCKIPSD-209ENST00000470006 XCL1P47992 114 aa11.59□□□□□ -0.55
NCKIPSD-209ENST00000470006 C1orf137Q5JT78 98 aa11.59□□□□□ -0.55
NCKIPSD-209ENST00000470006 PAGE4O60829 102 aa11.58□□□□□ -0.56
NCKIPSD-209ENST00000470006 PTTG1IPP53801 180 aa11.58□□□□□ -0.56
NCKIPSD-209ENST00000470006 IFITM3Q01628 133 aa11.58□□□□□ -0.56
NCKIPSD-209ENST00000470006 FOXI1Q12951 378 aa11.58□□□□□ -0.56
NCKIPSD-209ENST00000470006 IGHV1-58A0A0C4DH39 117 aa11.57□□□□□ -0.56
NCKIPSD-209ENST00000470006 ZNF561-AS1K7EIQ3 104 aa11.57□□□□□ -0.56
NCKIPSD-209ENST00000470006 SYCNQ0VAF6 134 aa11.57□□□□□ -0.56
NCKIPSD-209ENST00000470006 FER1L6-AS1Q8NA97 138 aa11.57□□□□□ -0.56
NCKIPSD-209ENST00000470006 MLST8Q9BVC4 326 aa11.57□□□□□ -0.56
NCKIPSD-209ENST00000470006 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
NCKIPSD-209ENST00000470006 NDUFA13Q9P0J0 144 aa11.56□□□□□ -0.56
NCKIPSD-209ENST00000470006 FAT4Q6V0I7 4981 aa11.56□□□□□ -0.56
NCKIPSD-209ENST00000470006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
NCKIPSD-209ENST00000470006 LOC107984640A0A0U1RRK4 108 aa11.55□□□□□ -0.56
NCKIPSD-209ENST00000470006 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
NCKIPSD-209ENST00000470006 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
NCKIPSD-209ENST00000470006 A0A1W2PNN7 141 aa11.54□□□□□ -0.56
NCKIPSD-209ENST00000470006 PFDN1O60925 122 aa11.54□□□□□ -0.56
NCKIPSD-209ENST00000470006 TRGC1P0CF51 173 aa11.54□□□□□ -0.56
NCKIPSD-209ENST00000470006 LINC00299Q6ZSB3 139 aa11.54□□□□□ -0.56
NCKIPSD-209ENST00000470006 CCL25O15444 150 aa11.53□□□□□ -0.56
NCKIPSD-209ENST00000470006 DEFA1P59665 94 aa11.53□□□□□ -0.56
NCKIPSD-209ENST00000470006 A0A1B0GV50 99 aa11.52□□□□□ -0.57
NCKIPSD-209ENST00000470006 FGF6P10767 208 aa11.52□□□□□ -0.57
NCKIPSD-209ENST00000470006 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
NCKIPSD-209ENST00000470006 ISOC2Q96AB3 205 aa11.52□□□□□ -0.57
NCKIPSD-209ENST00000470006 IGLC6P0CF74 106 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 NTF3P20783 257 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 RPS20P60866 119 aaKnown RBP11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 Q5BKY6 102 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 Q6ZNX1 250 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 TMUB2Q71RG4 321 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 TMEM101Q96IK0 257 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 BTF3L4Q96K17 158 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 MED28Q9H204 178 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
NCKIPSD-209ENST00000470006 FXYD6-FXYD2A0A087WZ82 144 aa11.5□□□□□ -0.57
NCKIPSD-209ENST00000470006 APCSP02743 223 aa11.5□□□□□ -0.57
NCKIPSD-209ENST00000470006 BCL2P10415 239 aa11.5□□□□□ -0.57
NCKIPSD-209ENST00000470006 CAMPP49913 170 aa11.5□□□□□ -0.57
NCKIPSD-209ENST00000470006 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
NCKIPSD-209ENST00000470006 C9orf116Q5BN46 136 aaPredicted RBP11.5□□□□□ -0.57
NCKIPSD-209ENST00000470006 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
NCKIPSD-209ENST00000470006 H7C423 109 aa11.49□□□□□ -0.57
NCKIPSD-209ENST00000470006 SFT2D1Q8WV19 159 aa11.49□□□□□ -0.57
NCKIPSD-209ENST00000470006 F2Z2F3 143 aa11.48□□□□□ -0.57
NCKIPSD-209ENST00000470006 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
NCKIPSD-209ENST00000470006 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
NCKIPSD-209ENST00000470006 SS18Q15532 418 aa11.48□□□□□ -0.57
NCKIPSD-209ENST00000470006 LYZL1Q6UWQ5 148 aa11.48□□□□□ -0.57
NCKIPSD-209ENST00000470006 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
NCKIPSD-209ENST00000470006 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
NCKIPSD-209ENST00000470006 XKRY2A2RUG3 117 aa11.47□□□□□ -0.57
NCKIPSD-209ENST00000470006 NCR2O95944 276 aa11.47□□□□□ -0.57
NCKIPSD-209ENST00000470006 RPL35P42766 123 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-209ENST00000470006 UBE2D1P51668 147 aa11.47□□□□□ -0.57
NCKIPSD-209ENST00000470006 A0A087WZ39 114 aa11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 H0Y9J4 135 aa11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 ZNF25P17030 456 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 MALP21145 153 aa11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 LCE2AQ5TA79 106 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 GATD1Q8NB37 220 aa11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
NCKIPSD-209ENST00000470006 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
NCKIPSD-209ENST00000470006 IFNA1P01562 189 aa11.45□□□□□ -0.58
NCKIPSD-209ENST00000470006 TWIST1Q15672 202 aa11.45□□□□□ -0.58
NCKIPSD-209ENST00000470006 APOMO95445 188 aa11.44□□□□□ -0.58
NCKIPSD-209ENST00000470006 EIF5AL1Q6IS14 154 aaKnown RBP11.44□□□□□ -0.58
NCKIPSD-209ENST00000470006 CD164L2Q6UWJ8 174 aa11.44□□□□□ -0.58
NCKIPSD-209ENST00000470006 KCNRGQ8N5I3 272 aa11.44□□□□□ -0.58
NCKIPSD-209ENST00000470006 FAM213BQ8TBF2 198 aa11.44□□□□□ -0.58
NCKIPSD-209ENST00000470006 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
NCKIPSD-209ENST00000470006 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
NCKIPSD-209ENST00000470006 PMCHP20382 165 aa11.42□□□□□ -0.58
NCKIPSD-209ENST00000470006 CENPWQ5EE01 88 aa11.42□□□□□ -0.58
NCKIPSD-209ENST00000470006 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
NCKIPSD-209ENST00000470006 OPRPNQ99935 248 aaPredicted RBP11.41□□□□□ -0.58
NCKIPSD-209ENST00000470006 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
NCKIPSD-209ENST00000470006 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
NCKIPSD-209ENST00000470006 RPL13AP40429 203 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-209ENST00000470006 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.58
NCKIPSD-209ENST00000470006 TSKUQ8WUA8 353 aa11.4□□□□□ -0.58
NCKIPSD-209ENST00000470006 C19orf71A6NCJ1 209 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms