RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 COLCA2A8K830 154 aa10.04□□□□□ -0.8
COL9A3-209ENST00000469852 PHOX2AO14813 284 aa10.04□□□□□ -0.8
COL9A3-209ENST00000469852 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
COL9A3-209ENST00000469852 PMCHP20382 165 aa10.04□□□□□ -0.8
COL9A3-209ENST00000469852 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
COL9A3-209ENST00000469852 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
COL9A3-209ENST00000469852 TRBV25-1A0A075B6N4 114 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 IGHV1-24A0A0C4DH33 117 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 NBDYA0A0U1RRE5 68 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 VCYO14598 125 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 IGHV3-30P01768 117 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 IGHV3-33P01772 117 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 IGHV3-30-3P0DP02 117 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 IGHV3-30-5P0DP03 117 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 S100A1P23297 94 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 RPL32P62910 135 aaKnown RBP10.03□□□□□ -0.8
COL9A3-209ENST00000469852 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 Q6ZR54 194 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 NIT1Q86X76 327 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
COL9A3-209ENST00000469852 CHCHD7Q9BUK0 85 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 DNAH10Q8IVF4 4471 aa10.03□□□□□ -0.8
COL9A3-209ENST00000469852 FRAS1Q86XX4 4008 aa10.02□□□□□ -0.8
COL9A3-209ENST00000469852 AMTP48728 403 aa10.02□□□□□ -0.81
COL9A3-209ENST00000469852 GAGE6Q13070 117 aa10.02□□□□□ -0.81
COL9A3-209ENST00000469852 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
COL9A3-209ENST00000469852 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
COL9A3-209ENST00000469852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
COL9A3-209ENST00000469852 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
COL9A3-209ENST00000469852 PRSS47A8MTI9 375 aa10.01□□□□□ -0.81
COL9A3-209ENST00000469852 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
COL9A3-209ENST00000469852 LINC01556Q5JQF7 62 aa10.01□□□□□ -0.81
COL9A3-209ENST00000469852 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
COL9A3-209ENST00000469852 TCAPO15273 167 aa10□□□□□ -0.81
COL9A3-209ENST00000469852 ESDP10768 282 aa10□□□□□ -0.81
COL9A3-209ENST00000469852 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
COL9A3-209ENST00000469852 RAB5AP20339 215 aa9.99□□□□□ -0.81
COL9A3-209ENST00000469852 Q8N976 141 aa9.99□□□□□ -0.81
COL9A3-209ENST00000469852 KIR2DL4Q99706 377 aa9.99□□□□□ -0.81
COL9A3-209ENST00000469852 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
COL9A3-209ENST00000469852 TRGC2P03986 189 aa9.98□□□□□ -0.81
COL9A3-209ENST00000469852 FCER1GP30273 86 aa9.98□□□□□ -0.81
COL9A3-209ENST00000469852 IFI27P40305 119 aaPredicted RBP9.98□□□□□ -0.81
COL9A3-209ENST00000469852 Q8N8P6 123 aa9.98□□□□□ -0.81
COL9A3-209ENST00000469852 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
COL9A3-209ENST00000469852 RBX1P62877 108 aa9.97□□□□□ -0.81
COL9A3-209ENST00000469852 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
COL9A3-209ENST00000469852 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
COL9A3-209ENST00000469852 A0A087WX48 190 aa9.96□□□□□ -0.82
COL9A3-209ENST00000469852 TTC32Q5I0X7 151 aa9.96□□□□□ -0.82
COL9A3-209ENST00000469852 C18orf32Q8TCD1 76 aa9.96□□□□□ -0.82
COL9A3-209ENST00000469852 UBE2L6O14933 153 aa9.95□□□□□ -0.82
COL9A3-209ENST00000469852 FGF6P10767 208 aa9.95□□□□□ -0.82
COL9A3-209ENST00000469852 RPL39P62891 51 aaKnown RBP9.95□□□□□ -0.82
COL9A3-209ENST00000469852 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
COL9A3-209ENST00000469852 URB1-AS1Q96HZ7 61 aa9.95□□□□□ -0.82
COL9A3-209ENST00000469852 KLK12Q9UKR0 248 aa9.95□□□□□ -0.82
COL9A3-209ENST00000469852 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
COL9A3-209ENST00000469852 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
COL9A3-209ENST00000469852 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
COL9A3-209ENST00000469852 TRAV9-2A0A087WT02 112 aa9.93□□□□□ -0.82
COL9A3-209ENST00000469852 ANGP03950 147 aaKnown RBP9.93□□□□□ -0.82
COL9A3-209ENST00000469852 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
COL9A3-209ENST00000469852 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
COL9A3-209ENST00000469852 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
COL9A3-209ENST00000469852 A0A1B0GUV1 79 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 H7C423 109 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 K7EP13 123 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 RTL8CO15255 209 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 PKIAP61925 76 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 RNASEKQ6P5S7 137 aaKnown RBP9.92□□□□□ -0.82
COL9A3-209ENST00000469852 ENHOQ6UWT2 76 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 Q9HAA7 133 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
COL9A3-209ENST00000469852 LAGE3Q14657 143 aa9.91□□□□□ -0.82
COL9A3-209ENST00000469852 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
COL9A3-209ENST00000469852 AMMECR1LQ6DCA0 310 aa9.91□□□□□ -0.82
COL9A3-209ENST00000469852 Q6ZRN7 208 aaPredicted RBP9.91□□□□□ -0.82
COL9A3-209ENST00000469852 MRPL52Q86TS9 123 aaKnown RBP9.91□□□□□ -0.82
COL9A3-209ENST00000469852 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
COL9A3-209ENST00000469852 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
COL9A3-209ENST00000469852 UBE2WQ96B02 151 aa9.91□□□□□ -0.82
COL9A3-209ENST00000469852 ZNF25P17030 456 aaPredicted RBP9.89□□□□□ -0.83
COL9A3-209ENST00000469852 ORMDL2Q53FV1 153 aa9.89□□□□□ -0.83
COL9A3-209ENST00000469852 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
COL9A3-209ENST00000469852 C2orf66Q6UXQ4 117 aa9.89□□□□□ -0.83
COL9A3-209ENST00000469852 FA2HQ7L5A8 372 aa9.89□□□□□ -0.83
COL9A3-209ENST00000469852 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
COL9A3-209ENST00000469852 PRR34Q9NV39 138 aa9.89□□□□□ -0.83
COL9A3-209ENST00000469852 DNAH11Q96DT5 4516 aa9.88□□□□□ -0.83
COL9A3-209ENST00000469852 K7EMI3 77 aa9.88□□□□□ -0.83
COL9A3-209ENST00000469852 REG3AQ06141 175 aa9.88□□□□□ -0.83
COL9A3-209ENST00000469852 Q6ZUT4 128 aa9.88□□□□□ -0.83
COL9A3-209ENST00000469852 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
COL9A3-209ENST00000469852 CDC42SE2Q9NRR3 84 aa9.88□□□□□ -0.83
COL9A3-209ENST00000469852 A0A096LNJ9 63 aa9.87□□□□□ -0.83
COL9A3-209ENST00000469852 IGKV3OR2-268A0A0C4DH90 116 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 237.8 ms