RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 FAM74A1Q5RGS3 127 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 DNLZQ5SXM8 178 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 ARL6IP6Q8N6S5 226 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 OR10AG1Q8NH19 301 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 RETNLBQ9BQ08 111 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 NDFIP1Q9BT67 221 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 SMIM3Q9BZL3 60 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 WFDC1Q9HC57 220 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 EPDR1Q9UM22 224 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 ARL2-SNX15V9GYD0 113 aa3.12□□□□□ -1.91
PTPN4-209ENST00000469511 TRBV25-1A0A075B6N4 114 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 TRAV6A0A075B6T7 132 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
PTPN4-209ENST00000469511 MT-ND6P03923 174 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 ARL14EPLP0DKL9 152 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 TPT1P13693 172 aaKnown RBP3.11□□□□□ -1.91
PTPN4-209ENST00000469511 RAB4BP61018 213 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 CYCSP99999 105 aaKnown RBP3.11□□□□□ -1.91
PTPN4-209ENST00000469511 C5orf17Q8NAS9 161 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 AQP10Q96PS8 301 aa3.11□□□□□ -1.91
PTPN4-209ENST00000469511 IGHV1-24A0A0C4DH33 117 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 C17orf112F2Z3M2 114 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 H0Y9J4 135 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 PLA2G10O15496 165 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 BCL2P10415 239 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 RPL12P30050 165 aaKnown RBP3.1□□□□□ -1.91
PTPN4-209ENST00000469511 TAS2R45P59539 299 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 ZFP69Q49AA0 526 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 LRRC37A5PQ49AS3 106 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 C9orf116Q5BN46 136 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-209ENST00000469511 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 FER1L6-AS1Q8NA97 138 aa3.1□□□□□ -1.91
PTPN4-209ENST00000469511 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-209ENST00000469511 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 FAM168BA1KXE4 195 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 NAP1L6A6NFF2 107 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 STAG3L2P0CL84 134 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 STAG3L3P0CL85 134 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 GZMBP10144 247 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 GCHFRP30047 84 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 SULT1A2P50226 295 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 TMBIM6P55061 237 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 SAPCD1Q5SSQ6 148 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 SMIM29Q86T20 159 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 Q86TA4 180 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 ZFP82Q8N141 532 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 DEDD2Q8WXF8 326 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 DIRC1Q969H9 104 aa3.09□□□□□ -1.91
PTPN4-209ENST00000469511 SERTM2A0A1B0GWG4 89 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 M0QY20 66 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 NKX2-5P52952 324 aaPredicted RBP3.08□□□□□ -1.92
PTPN4-209ENST00000469511 PKIAP61925 76 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 ZNF674Q2M3X9 581 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 PET117Q6UWS5 81 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 CARD19Q96LW7 228 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 OPRPNQ99935 248 aaPredicted RBP3.08□□□□□ -1.92
PTPN4-209ENST00000469511 TMEM243Q9BU79 118 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 KCNIP2Q9NS61 270 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 HSPB11Q9Y547 144 aa3.08□□□□□ -1.92
PTPN4-209ENST00000469511 A0A087WZ39 114 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 A0A087X002 238 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 K7EQM0 130 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 IL7P13232 177 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 CDC34P49427 236 aaPredicted RBP3.07□□□□□ -1.92
PTPN4-209ENST00000469511 DEFA1P59665 94 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 UBE2G2P60604 165 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 SYCNQ0VAF6 134 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 TMEM97Q5BJF2 176 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 TRIQKQ629K1 86 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 COX8CQ7Z4L0 72 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 SCGB1C1Q8TD33 95 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 MRPS26Q9BYN8 205 aaKnown RBP3.07□□□□□ -1.92
PTPN4-209ENST00000469511 NUDT15Q9NV35 164 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 LINC00474Q9P2X8 69 aa3.07□□□□□ -1.92
PTPN4-209ENST00000469511 IGLV4-69A0A075B6H9 119 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 TRAV1-1A0A0B4J248 108 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.06□□□□□ -1.92
PTPN4-209ENST00000469511 PEX7O00628 323 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 CCL25O15444 150 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 SNAI2O43623 268 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 TSHBP01222 138 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 MGPP08493 103 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 XCL1P47992 114 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 UBE2D1P51668 147 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 LINC01547P58512 204 aaPredicted RBP3.06□□□□□ -1.92
PTPN4-209ENST00000469511 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
PTPN4-209ENST00000469511 ZNF726P1Q15940 193 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 NUP35Q8NFH5 326 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 OCC1Q8TAD7 63 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 RPP21Q9H633 154 aaKnown RBP3.06□□□□□ -1.92
PTPN4-209ENST00000469511 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
PTPN4-209ENST00000469511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.05□□□□□ -1.92
PTPN4-209ENST00000469511 IGHV1-58A0A0C4DH39 117 aa3.05□□□□□ -1.92
PTPN4-209ENST00000469511 LOC107984640A0A0U1RRK4 108 aa3.05□□□□□ -1.92
PTPN4-209ENST00000469511 IGKV2-29A2NJV5 120 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms