RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
MSX1-202ENST00000468421 DAZ3Q9NR90 486 aaKnown RBP7.47□□□□□ -1.21
MSX1-202ENST00000468421 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
MSX1-202ENST00000468421 H3BNG1 76 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 K7EMI3 77 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 HBDP02042 147 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 FABP4P15090 132 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 FCER1GP30273 86 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 COTL1Q14019 142 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 ORMDL2Q53FV1 153 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 LINC00173Q6ZV60 143 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 HIST1H2BLQ99880 126 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 CHCHD7Q9BUK0 85 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.22
MSX1-202ENST00000468421 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
MSX1-202ENST00000468421 NUDT3O95989 172 aa7.45□□□□□ -1.22
MSX1-202ENST00000468421 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
MSX1-202ENST00000468421 S100A2P29034 98 aa7.45□□□□□ -1.22
MSX1-202ENST00000468421 RPL39P62891 51 aaKnown RBP7.45□□□□□ -1.22
MSX1-202ENST00000468421 MRPL23Q16540 153 aaKnown RBP7.45□□□□□ -1.22
MSX1-202ENST00000468421 C2orf66Q6UXQ4 117 aa7.44□□□□□ -1.22
MSX1-202ENST00000468421 TMEM18Q96B42 140 aa7.44□□□□□ -1.22
MSX1-202ENST00000468421 GTSF1LQ9H1H1 148 aa7.44□□□□□ -1.22
MSX1-202ENST00000468421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.43□□□□□ -1.22
MSX1-202ENST00000468421 IGKV2-29A2NJV5 120 aaPredicted RBP7.43□□□□□ -1.22
MSX1-202ENST00000468421 C20orf203Q8NBC4 194 aa7.43□□□□□ -1.22
MSX1-202ENST00000468421 TOMM6Q96B49 74 aa7.43□□□□□ -1.22
MSX1-202ENST00000468421 PACRGQ96M98 296 aaPredicted RBP7.43□□□□□ -1.22
MSX1-202ENST00000468421 TRBV6-8A0A0A6YYG3 113 aa7.42□□□□□ -1.22
MSX1-202ENST00000468421 LEPROTL1O95214 131 aa7.42□□□□□ -1.22
MSX1-202ENST00000468421 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
MSX1-202ENST00000468421 KMT2CQ8NEZ4 4911 aaKnown RBP7.42□□□□□ -1.22
MSX1-202ENST00000468421 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
MSX1-202ENST00000468421 IGLL5B9A064 214 aa7.41□□□□□ -1.22
MSX1-202ENST00000468421 TMEM97Q5BJF2 176 aa7.41□□□□□ -1.22
MSX1-202ENST00000468421 SH2D6Q7Z4S9 175 aa7.41□□□□□ -1.22
MSX1-202ENST00000468421 OR10D4PQ8NGN7 298 aa7.41□□□□□ -1.22
MSX1-202ENST00000468421 TMEM243Q9BU79 118 aa7.41□□□□□ -1.22
MSX1-202ENST00000468421 C3orf79P0CE67 100 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 GAGE6Q13070 117 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 CEMP1Q6PRD7 247 aaPredicted RBP7.4□□□□□ -1.22
MSX1-202ENST00000468421 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 FAM104AQ969W3 186 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 SCGB3A1Q96QR1 104 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 UBE2D4Q9Y2X8 147 aa7.4□□□□□ -1.22
MSX1-202ENST00000468421 IGIPA6NJ69 53 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 G0S2P27469 103 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 ESRGQ1W209 222 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 ERASQ7Z444 233 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 SPATA12Q7Z6I5 190 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 IFI27L1Q96BM0 104 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 OPRPNQ99935 248 aaPredicted RBP7.39□□□□□ -1.23
MSX1-202ENST00000468421 CHCHD5Q9BSY4 110 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
MSX1-202ENST00000468421 IGLV4-3A0A075B6K6 122 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 ATP5LO75964 103 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 FGF6P10767 208 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 AKR1D1P51857 326 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 TIRAPP58753 221 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 KRTDAPP60985 99 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 LELP1Q5T871 98 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 ZC2HC1BQ5TFG8 222 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 TIMM17AQ99595 171 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 APLNQ9ULZ1 77 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 STAB2Q8WWQ8 2551 aa7.38□□□□□ -1.23
MSX1-202ENST00000468421 DYNC2H1Q8NCM8 4307 aaKnown RBP7.38□□□□□ -1.23
MSX1-202ENST00000468421 NUPR2A6NF83 97 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 LINC01549A6NIU2 74 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 UBE2L6O14933 153 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 RNASE13Q5GAN3 156 aaKnown RBP7.37□□□□□ -1.23
MSX1-202ENST00000468421 Q6ZUT4 128 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 MRPL52Q86TS9 123 aaKnown RBP7.37□□□□□ -1.23
MSX1-202ENST00000468421 Q8N3U1 123 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 TIMM21Q9BVV7 248 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 SPANXA1Q9NS26 97 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 PYGO1Q9Y3Y4 419 aa7.37□□□□□ -1.23
MSX1-202ENST00000468421 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 H0Y8G0 127 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.36□□□□□ -1.23
MSX1-202ENST00000468421 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 H7C423 109 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 MPV17L2Q567V2 206 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 ZFAND6Q6FIF0 208 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 Q8N976 141 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 MAP1LC3CQ9BXW4 147 aa7.36□□□□□ -1.23
MSX1-202ENST00000468421 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
MSX1-202ENST00000468421 Q6ZN92 141 aa7.35□□□□□ -1.23
MSX1-202ENST00000468421 WFDC10BQ8IUB3 73 aa7.35□□□□□ -1.23
MSX1-202ENST00000468421 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
MSX1-202ENST00000468421 TMEM262E9PQX1 116 aa7.34□□□□□ -1.23
MSX1-202ENST00000468421 PRSS1P07477 247 aa7.34□□□□□ -1.23
MSX1-202ENST00000468421 RBX1P62877 108 aa7.34□□□□□ -1.23
MSX1-202ENST00000468421 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
MSX1-202ENST00000468421 PYY3Q5JQD4 70 aa7.34□□□□□ -1.23
MSX1-202ENST00000468421 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
MSX1-202ENST00000468421 OR5A1Q8NGJ0 315 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms