RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 MT-ND6P03923 174 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.9□□□□□ -0.5
LST1-220ENST00000464526 IGKV2-29A2NJV5 120 aaPredicted RBP11.9□□□□□ -0.5
LST1-220ENST00000464526 I3L3M4 83 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 SIVA1O15304 175 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 IGHV3-30P01768 117 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 IGHV3-33P01772 117 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 IGHV3-30-3P0DP02 117 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 IGHV3-30-5P0DP03 117 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 PMCHP20382 165 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 COTL1Q14019 142 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 CHCHD7Q9BUK0 85 aa11.9□□□□□ -0.5
LST1-220ENST00000464526 PHOX2AO14813 284 aa11.89□□□□□ -0.51
LST1-220ENST00000464526 GAGE6Q13070 117 aa11.89□□□□□ -0.51
LST1-220ENST00000464526 C20orf78Q9BR46 151 aa11.89□□□□□ -0.51
LST1-220ENST00000464526 TRGC2P03986 189 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 RAB5AP20339 215 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 NIT1Q86X76 327 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 Q8N976 141 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 AMTP48728 403 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 COX19Q49B96 90 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 CHCHD5Q9BSY4 110 aa11.88□□□□□ -0.51
LST1-220ENST00000464526 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
LST1-220ENST00000464526 IGHV1-24A0A0C4DH33 117 aa11.87□□□□□ -0.51
LST1-220ENST00000464526 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
LST1-220ENST00000464526 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
LST1-220ENST00000464526 TRAV8-6A0A0B4J262 113 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 VCYO14598 125 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 URB1-AS1Q96HZ7 61 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 PPP1R17O96001 155 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 ESDP10768 282 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 Q6ZR54 194 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
LST1-220ENST00000464526 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
LST1-220ENST00000464526 RPL32P62910 135 aaKnown RBP11.85□□□□□ -0.51
LST1-220ENST00000464526 C18orf32Q8TCD1 76 aa11.85□□□□□ -0.51
LST1-220ENST00000464526 LAMTOR2Q9Y2Q5 125 aa11.85□□□□□ -0.51
LST1-220ENST00000464526 DNAH11Q96DT5 4516 aa11.84□□□□□ -0.51
LST1-220ENST00000464526 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
LST1-220ENST00000464526 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
LST1-220ENST00000464526 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
LST1-220ENST00000464526 LINC01556Q5JQF7 62 aa11.84□□□□□ -0.51
LST1-220ENST00000464526 TMEM262E9PQX1 116 aa11.83□□□□□ -0.51
LST1-220ENST00000464526 FCER1GP30273 86 aa11.83□□□□□ -0.52
LST1-220ENST00000464526 RBX1P62877 108 aa11.83□□□□□ -0.52
LST1-220ENST00000464526 Q8N8P6 123 aa11.83□□□□□ -0.52
LST1-220ENST00000464526 CLPSL2Q6UWE3 100 aa11.82□□□□□ -0.52
LST1-220ENST00000464526 KIR2DL4Q99706 377 aa11.82□□□□□ -0.52
LST1-220ENST00000464526 TMEM97Q5BJF2 176 aa11.81□□□□□ -0.52
LST1-220ENST00000464526 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
LST1-220ENST00000464526 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
LST1-220ENST00000464526 A0A087WX48 190 aa11.79□□□□□ -0.52
LST1-220ENST00000464526 FGF6P10767 208 aa11.79□□□□□ -0.52
LST1-220ENST00000464526 FAM104AQ969W3 186 aa11.79□□□□□ -0.52
LST1-220ENST00000464526 RNASE13Q5GAN3 156 aaKnown RBP11.79□□□□□ -0.52
LST1-220ENST00000464526 PKD1P98161 4303 aa11.78□□□□□ -0.52
LST1-220ENST00000464526 UBE2L6O14933 153 aa11.78□□□□□ -0.52
LST1-220ENST00000464526 LINC00310P59036 64 aa11.78□□□□□ -0.52
LST1-220ENST00000464526 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
LST1-220ENST00000464526 Q9HAA7 133 aa11.78□□□□□ -0.52
LST1-220ENST00000464526 PMCHL1Q16048 86 aa11.77□□□□□ -0.52
LST1-220ENST00000464526 RNASEKQ6P5S7 137 aaKnown RBP11.77□□□□□ -0.52
LST1-220ENST00000464526 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.52
LST1-220ENST00000464526 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.52
LST1-220ENST00000464526 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.52
LST1-220ENST00000464526 A0A096LNJ9 63 aa11.76□□□□□ -0.53
LST1-220ENST00000464526 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
LST1-220ENST00000464526 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
LST1-220ENST00000464526 Q6ZUT4 128 aa11.76□□□□□ -0.53
LST1-220ENST00000464526 LINC00269Q8N2A0 174 aa11.76□□□□□ -0.53
LST1-220ENST00000464526 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
LST1-220ENST00000464526 RTL8CO15255 209 aa11.75□□□□□ -0.53
LST1-220ENST00000464526 LAGE3Q14657 143 aa11.75□□□□□ -0.53
LST1-220ENST00000464526 UBE2WQ96B02 151 aa11.75□□□□□ -0.53
LST1-220ENST00000464526 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 Q6ZRN7 208 aaPredicted RBP11.74□□□□□ -0.53
LST1-220ENST00000464526 PKHD1P08F94 4074 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HECTD4Q9Y4D8 3996 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 NUPR1O60356 82 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BKO60814 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BJP06899 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BOP23527 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BBP33778 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BDP58876 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BCP62807 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST2H2BEQ16778 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.74□□□□□ -0.53
LST1-220ENST00000464526 ZC2HC1BQ5TFG8 222 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 AMMECR1LQ6DCA0 310 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 C2orf66Q6UXQ4 117 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BHQ93079 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BNQ99877 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 HIST1H2BMQ99879 126 aa11.74□□□□□ -0.53
LST1-220ENST00000464526 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
LST1-220ENST00000464526 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
LST1-220ENST00000464526 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms