RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
CCNL1-204ENST00000464316 RAI1Q7Z5J4 1906 aaPredicted RBP2.85□□□□□ -1.95
CCNL1-204ENST00000464316 BCE1O60756 84 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 LINC00158P58513 81 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 LINC01560Q8TB33 94 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 ZDBF2Q9HCK1 2354 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 UBE2L6O14933 153 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 RNASE13Q5GAN3 156 aaKnown RBP2.85□□□□□ -1.95
CCNL1-204ENST00000464316 PLA2G2CQ5R387 149 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 UNQ9165/PRO28630Q6UXU0 137 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 Q6ZSV7 163 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 TMEM86BQ8N661 226 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 C5orf56Q8N8D9 126 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 SMCR5Q8TEV8 140 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 SND1-IT1Q9HBX3 110 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 C14orf132Q9NPU4 83 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 CACNA1HO95180 2353 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 SMIM26A0A096LP01 95 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 SPINK13Q1W4C9 94 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 DEFB124Q8NES8 71 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 Q9HAA7 133 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 ZNF580Q9UK33 172 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 UBE2D4Q9Y2X8 147 aa2.85□□□□□ -1.95
CCNL1-204ENST00000464316 C5orf42Q9H799 3197 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 IGHV3-73A0A0B4J1V6 119 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 TRBV10-3A0A0K0K1G6 114 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 NDUFC1O43677 76 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 PSMB8P28062 276 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 PFN2P35080 140 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 DEFB1P60022 68 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 RPL36AP83881 106 aaKnown RBP2.84□□□□□ -1.95
CCNL1-204ENST00000464316 RPL36ALQ969Q0 106 aaKnown RBP2.84□□□□□ -1.95
CCNL1-204ENST00000464316 BRCA2P51587 3418 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.84□□□□□ -1.95
CCNL1-204ENST00000464316 IGKV2-29A2NJV5 120 aaPredicted RBP2.84□□□□□ -1.95
CCNL1-204ENST00000464316 RS1O15537 224 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 PAX4O43316 350 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
CCNL1-204ENST00000464316 IGF2-ASQ6U949 168 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 C20orf197Q8N268 126 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 RNF152Q8N8N0 203 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 KIR2DL5BQ8NHK3 375 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 SIRPDQ9H106 197 aa2.84□□□□□ -1.95
CCNL1-204ENST00000464316 GPR179Q6PRD1 2367 aa2.84□□□□□ -1.96
CCNL1-204ENST00000464316 IGLV5-45A0A087WSX0 123 aa2.84□□□□□ -1.96
CCNL1-204ENST00000464316 TMEM256-PLSCR3K7ERE1 68 aa2.84□□□□□ -1.96
CCNL1-204ENST00000464316 HOXD3P31249 432 aaPredicted RBP2.84□□□□□ -1.96
CCNL1-204ENST00000464316 C10orf105Q8TEF2 133 aa2.84□□□□□ -1.96
CCNL1-204ENST00000464316 IGLV5-39A0A0G2JS06 123 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 A8MZ25 164 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 LECT2O14960 151 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 CCKP06307 115 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 C4orf26Q17RF5 130 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 TOMM7Q9P0U1 55 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 ARHGAP32A7KAX9 2087 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 PRRC2AP48634 2157 aaKnown RBP2.83□□□□□ -1.96
CCNL1-204ENST00000464316 LINC00846Q9NV44 126 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 CNOT1A5YKK6 2376 aaKnown RBP2.83□□□□□ -1.96
CCNL1-204ENST00000464316 TRAV7A0A075B6U4 112 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 IGHV3OR16-10A0A075B7F0 116 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 H3BQ85 93 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 LY6HO94772 140 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 IGHV3-53P01767 116 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
CCNL1-204ENST00000464316 LINC00467Q9BRT7 94 aa2.83□□□□□ -1.96
CCNL1-204ENST00000464316 NACAE9PAV3 2078 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 TRAV23DV6A0A075B6W5 121 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 PDE6GP18545 87 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 MIR7-3HGQ8N6C7 128 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 CHCHD7Q9BUK0 85 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 CACNA1BQ00975 2339 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 XCL1P47992 114 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 LCE2DQ5TA82 110 aaPredicted RBP2.82□□□□□ -1.96
CCNL1-204ENST00000464316 XCL2Q9UBD3 114 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 CMYA5Q8N3K9 4069 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 A0A087WVE0 104 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 IGHV3-38A0A0C4DH36 116 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 IBA57-AS1B1ANH7 110 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 K7EQG2 157 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 TRBV12-3P01733 135 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 LY6EQ16553 131 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 BEAN1Q3B7T3 259 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 FBXL19-AS1Q494R0 122 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 LINC00242Q5T6M2 205 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 Q8N2B8 174 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 SMIM11BQ8TCY0 68 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 COX7B2Q8TF08 81 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 UPK3BQ9BT76 320 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 LAMTOR3Q9UHA4 124 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 V9GYY9 64 aa2.82□□□□□ -1.96
CCNL1-204ENST00000464316 SMIM1B2RUZ4 78 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 CCL21O00585 134 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 ZFP36P26651 326 aaKnown RBP2.81□□□□□ -1.96
CCNL1-204ENST00000464316 C11orf68Q9H3H3 251 aaKnown RBP2.81□□□□□ -1.96
CCNL1-204ENST00000464316 SPTBN1Q01082 2364 aaKnown RBP2.81□□□□□ -1.96
CCNL1-204ENST00000464316 TMEM89A2RUT3 159 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 NCR3O14931 201 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 C6orf226Q5I0X4 101 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms