RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 UNQ9165/PRO28630Q6UXU0 137 aa4.43□□□□□ -1.7
SMARCC1-204ENST00000462198 FAM231DQ6ZW35 169 aa4.43□□□□□ -1.7
SMARCC1-204ENST00000462198 SH2D6Q7Z4S9 175 aa4.43□□□□□ -1.7
SMARCC1-204ENST00000462198 DYNLRB2Q8TF09 96 aa4.43□□□□□ -1.7
SMARCC1-204ENST00000462198 LINC01587Q99440 93 aa4.43□□□□□ -1.7
SMARCC1-204ENST00000462198 DAZ1Q9NQZ3 744 aaKnown RBP4.43□□□□□ -1.7
SMARCC1-204ENST00000462198 A0A1B0GXF2 115 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 NUPR2A6NF83 97 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 K7EMT4 169 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 IGKV1-17P01599 117 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 TMEM258P61165 79 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 CEMP1Q6PRD7 247 aaPredicted RBP4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 LINC00336Q6ZUF6 198 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 THAP8Q8NA92 274 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 PHLDA1Q8WV24 401 aaPredicted RBP4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 IGF2BP2-AS1Q96M15 143 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 METTL26Q96S19 204 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 TRGV9Q99603 122 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 KIR2DL4Q99706 377 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 MLST8Q9BVC4 326 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 SLC25A2Q9BXI2 301 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 TMEM167BQ9NRX6 74 aa4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 TECRQ9NZ01 308 aaKnown RBP4.42□□□□□ -1.7
SMARCC1-204ENST00000462198 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 IGKV1OR2-108A0A075B7D4 117 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 IGHV3-49A0A0A0MS15 119 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 TINCRA0A1B0GVN0 87 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 A8MWV9 139 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 M0R2P5 195 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 IL4P05112 153 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 CENPWQ5EE01 88 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 C9orf153Q5TBE3 101 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 C10orf126Q8N4M7 172 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 C3orf22Q8N5N4 141 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 OR1L4Q8NGR5 311 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 ZNF503Q96F45 646 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 LINC00526Q96FQ7 95 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 KLK5Q9Y337 293 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 SELENOKQ9Y6D0 94 aa4.41□□□□□ -1.7
SMARCC1-204ENST00000462198 VPS13DQ5THJ4 4388 aa4.4□□□□□ -1.7
SMARCC1-204ENST00000462198 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 IGHV3-74A0A0B4J1X5 117 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 IGHV3-66A0A0C4DH42 116 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 IGHV7-4-1A0A0J9YVY3 117 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 FAM240AA0A1B0GVK7 77 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 CHEK1O14757 476 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 IGLV1-51P01701 117 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 SCGB1C2P0DMR2 95 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 MGST1P10620 155 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 LYZP61626 148 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 DEFB114Q30KQ6 69 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 GDF5OSQ5U4N7 250 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 MIC13Q5XKP0 118 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 CEND1Q8N111 149 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 ZNF414Q96IQ9 312 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 LINC01600Q96MT4 127 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 RHPN1-AS1Q9BWJ2 59 aa4.4□□□□□ -1.71
SMARCC1-204ENST00000462198 ATP5LO75964 103 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 APOHP02749 345 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 NMUP48645 174 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 HERVK_113P63121 156 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 RBMY1FQ15415 496 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 LINC00322Q6ZN03 302 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 GTSCR1Q86UQ5 136 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 TMEM61Q8N0U2 210 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 NAA38Q9BRA0 125 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 CHAC1Q9BUX1 264 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 RNASE7Q9H1E1 156 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 PKD1P98161 4303 aa4.39□□□□□ -1.71
SMARCC1-204ENST00000462198 IGKV3-7A0A075B6H7 116 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 COX7A2P2O60397 106 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 IGLC6P0CF74 106 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 CRYGAP11844 174 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 GNG5P63218 68 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 HBBP68871 147 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 ZC2HC1AQ96GY0 325 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 FAM167A-AS1Q96KT0 104 aa4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 NHP2Q9NX24 153 aaKnown RBP4.38□□□□□ -1.71
SMARCC1-204ENST00000462198 A8MWL6 223 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 BUB3O43684 328 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 DPM2O94777 84 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 FXYD2P54710 66 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 C12orf74Q32Q52 190 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 C10orf113Q5VZT2 155 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 MIR17HGQ75NE6 70 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 APRG1Q8IVJ8 170 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 Q8N1X5 172 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 PLEKHB2Q96CS7 222 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 SLC25A39Q9BZJ4 359 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms