RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 HSBP1O75506 76 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 GYPEP15421 78 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 GAGE1Q13065 139 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 GAGE4Q13068 117 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 GAGE5Q13069 117 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 SH2D6Q7Z4S9 175 aa9.38□□□□□ -0.91
SF1-210ENST00000443908 HYDINQ4G0P3 5121 aa9.37□□□□□ -0.91
SF1-210ENST00000443908 ORMDL2Q53FV1 153 aa9.37□□□□□ -0.91
SF1-210ENST00000443908 TMEM97Q5BJF2 176 aa9.37□□□□□ -0.91
SF1-210ENST00000443908 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
SF1-210ENST00000443908 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
SF1-210ENST00000443908 NUPR1O60356 82 aa9.36□□□□□ -0.91
SF1-210ENST00000443908 TSHBP01222 138 aa9.36□□□□□ -0.91
SF1-210ENST00000443908 SNRPEP62304 92 aaKnown RBP9.36□□□□□ -0.91
SF1-210ENST00000443908 LAGE3Q14657 143 aa9.36□□□□□ -0.91
SF1-210ENST00000443908 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
SF1-210ENST00000443908 HIST3H2BBQ8N257 126 aa9.36□□□□□ -0.91
SF1-210ENST00000443908 ICOSQ9Y6W8 199 aa9.36□□□□□ -0.91
SF1-210ENST00000443908 A0A0J9YY99 117 aa9.35□□□□□ -0.91
SF1-210ENST00000443908 LINC01549A6NIU2 74 aa9.35□□□□□ -0.91
SF1-210ENST00000443908 G0S2P27469 103 aa9.35□□□□□ -0.91
SF1-210ENST00000443908 COTL1Q14019 142 aa9.35□□□□□ -0.91
SF1-210ENST00000443908 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
SF1-210ENST00000443908 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
SF1-210ENST00000443908 IGHV1-24A0A0C4DH33 117 aa9.34□□□□□ -0.91
SF1-210ENST00000443908 FCER1GP30273 86 aa9.34□□□□□ -0.91
SF1-210ENST00000443908 ATP6V0E2Q8NHE4 81 aa9.34□□□□□ -0.91
SF1-210ENST00000443908 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
SF1-210ENST00000443908 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
SF1-210ENST00000443908 A0A096LNJ9 63 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 A0A096LPF7 62 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 HBDP02042 147 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 AMTP48728 403 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
SF1-210ENST00000443908 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
SF1-210ENST00000443908 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
SF1-210ENST00000443908 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
SF1-210ENST00000443908 NUDT3O95989 172 aa9.32□□□□□ -0.92
SF1-210ENST00000443908 S100A2P29034 98 aa9.32□□□□□ -0.92
SF1-210ENST00000443908 TIRAPP58753 221 aa9.32□□□□□ -0.92
SF1-210ENST00000443908 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 C20orf203Q8NBC4 194 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
SF1-210ENST00000443908 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
SF1-210ENST00000443908 IFITM10A6NMD0 228 aa9.3□□□□□ -0.92
SF1-210ENST00000443908 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
SF1-210ENST00000443908 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
SF1-210ENST00000443908 TOMM6Q96B49 74 aa9.3□□□□□ -0.92
SF1-210ENST00000443908 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
SF1-210ENST00000443908 H7C423 109 aa9.29□□□□□ -0.92
SF1-210ENST00000443908 BTF3P20290 206 aaKnown RBP9.29□□□□□ -0.92
SF1-210ENST00000443908 LEPROTL1O95214 131 aa9.28□□□□□ -0.92
SF1-210ENST00000443908 NPSP0C0P6 89 aa9.28□□□□□ -0.92
SF1-210ENST00000443908 SMAGPQ0VAQ4 97 aa9.28□□□□□ -0.92
SF1-210ENST00000443908 TMEM243Q9BU79 118 aa9.28□□□□□ -0.92
SF1-210ENST00000443908 HSPB8Q9UJY1 196 aa9.28□□□□□ -0.92
SF1-210ENST00000443908 ATP5LO75964 103 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 FABP4P15090 132 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 PLECQ15149 4684 aaKnown RBP9.27□□□□□ -0.93
SF1-210ENST00000443908 LELP1Q5T871 98 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 ERASQ7Z444 233 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 MRPL52Q86TS9 123 aaKnown RBP9.27□□□□□ -0.93
SF1-210ENST00000443908 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 SPANXA1Q9NS26 97 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 PYGO1Q9Y3Y4 419 aa9.27□□□□□ -0.93
SF1-210ENST00000443908 TCTAP57738 103 aa9.26□□□□□ -0.93
SF1-210ENST00000443908 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
SF1-210ENST00000443908 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
SF1-210ENST00000443908 ALMS1Q8TCU4 4167 aa9.25□□□□□ -0.93
SF1-210ENST00000443908 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
SF1-210ENST00000443908 IGLL5B9A064 214 aa9.25□□□□□ -0.93
SF1-210ENST00000443908 PKIAP61925 76 aa9.25□□□□□ -0.93
SF1-210ENST00000443908 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
SF1-210ENST00000443908 UBE2D4Q9Y2X8 147 aa9.25□□□□□ -0.93
SF1-210ENST00000443908 CSDC2Q9Y534 153 aaKnown RBP9.25□□□□□ -0.93
SF1-210ENST00000443908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.24□□□□□ -0.93
SF1-210ENST00000443908 LOC105371267A0A1B0GV96 52 aa9.24□□□□□ -0.93
SF1-210ENST00000443908 IGKV2-29A2NJV5 120 aaPredicted RBP9.24□□□□□ -0.93
SF1-210ENST00000443908 UBE2L6O14933 153 aa9.24□□□□□ -0.93
SF1-210ENST00000443908 ZNF25P17030 456 aaPredicted RBP9.24□□□□□ -0.93
SF1-210ENST00000443908 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
SF1-210ENST00000443908 IFI27L1Q96BM0 104 aa9.24□□□□□ -0.93
SF1-210ENST00000443908 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
SF1-210ENST00000443908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.23□□□□□ -0.93
SF1-210ENST00000443908 CHCHD5Q9BSY4 110 aa9.23□□□□□ -0.93
SF1-210ENST00000443908 FGF6P10767 208 aa9.22□□□□□ -0.93
SF1-210ENST00000443908 MRPS36P82909 103 aaKnown RBP9.22□□□□□ -0.93
SF1-210ENST00000443908 ESRGQ1W209 222 aa9.22□□□□□ -0.93
SF1-210ENST00000443908 PAPPA-AS1Q5QFB9 102 aa9.22□□□□□ -0.93
SF1-210ENST00000443908 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms