RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 SSBP4Q9BWG4 385 aaPredicted RBP5.35□□□□□ -1.55
VNN3-208ENST00000427187 MAP1LC3B2A6NCE7 125 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 UBE2L6O14933 153 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 OR5AL1P0C617 328 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 GZMBP10144 247 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 DEFA1P59665 94 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 CFAP161Q6P656 301 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 NKX6-2Q9C056 277 aaPredicted RBP5.34□□□□□ -1.55
VNN3-208ENST00000427187 MAP1LC3BQ9GZQ8 125 aa5.34□□□□□ -1.55
VNN3-208ENST00000427187 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
VNN3-208ENST00000427187 A0A1B0GV50 99 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 SCO2A0A1W2PP80 73 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 PAGE4O60829 102 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 CXCL1P09341 107 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 AMTP48728 403 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 AKR1C8PQ5T2L2 129 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 Q6ZRP5 223 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 CHCHD10Q8WYQ3 142 aaPredicted RBP5.33□□□□□ -1.56
VNN3-208ENST00000427187 ALG5Q9Y673 324 aa5.33□□□□□ -1.56
VNN3-208ENST00000427187 FHITP49789 147 aa5.32□□□□□ -1.56
VNN3-208ENST00000427187 RASL11AQ6T310 242 aa5.32□□□□□ -1.56
VNN3-208ENST00000427187 AKAP14Q86UN6 197 aa5.32□□□□□ -1.56
VNN3-208ENST00000427187 BAGE2Q86Y30 109 aa5.32□□□□□ -1.56
VNN3-208ENST00000427187 MLST8Q9BVC4 326 aa5.32□□□□□ -1.56
VNN3-208ENST00000427187 FXYD6-FXYD2A0A087WZ82 144 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 BORCS7-ASMTA0A0B4J1R7 106 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 LINC00862A6NCI5 91 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 FAM231BA6NCW3 169 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 S100A12P80511 92 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 FOXI1Q12951 378 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 COTL1Q14019 142 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 PRR26Q8N8Z3 221 aa5.31□□□□□ -1.56
VNN3-208ENST00000427187 TMA7Q9Y2S6 64 aaKnown RBP5.31□□□□□ -1.56
VNN3-208ENST00000427187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.3□□□□□ -1.56
VNN3-208ENST00000427187 IGKV2-29A2NJV5 120 aaPredicted RBP5.3□□□□□ -1.56
VNN3-208ENST00000427187 XCL1P47992 114 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 GAGE2BQ13066 116 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 AMMECR1LQ6DCA0 310 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 RNASEKQ6P5S7 137 aaKnown RBP5.3□□□□□ -1.56
VNN3-208ENST00000427187 FER1L6-AS1Q8NA97 138 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 PGLYRP4Q96LB8 373 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 CARD19Q96LW7 228 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 TCEAL7Q9BRU2 100 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 LINC00474Q9P2X8 69 aa5.3□□□□□ -1.56
VNN3-208ENST00000427187 TRAV26-2A0A0B4J265 109 aa5.29□□□□□ -1.56
VNN3-208ENST00000427187 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
VNN3-208ENST00000427187 IGLC6P0CF74 106 aa5.29□□□□□ -1.56
VNN3-208ENST00000427187 LINC00518Q8N0U6 118 aa5.29□□□□□ -1.56
VNN3-208ENST00000427187 NIT2Q9NQR4 276 aa5.29□□□□□ -1.56
VNN3-208ENST00000427187 PSORS1C2Q9UIG4 136 aa5.29□□□□□ -1.56
VNN3-208ENST00000427187 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 CCL25O15444 150 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 MT-ND6P03923 174 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 S100A9P06702 114 aaKnown RBP5.28□□□□□ -1.56
VNN3-208ENST00000427187 BCL2P10415 239 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 RPL35P42766 123 aaKnown RBP5.28□□□□□ -1.56
VNN3-208ENST00000427187 PTTG1IPP53801 180 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 CACNG7P62955 275 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 C1orf137Q5JT78 98 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 OR2D3Q8NGH3 330 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 MED28Q9H204 178 aa5.28□□□□□ -1.56
VNN3-208ENST00000427187 S100A6P06703 90 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 FGF6P10767 208 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 NTF3P20783 257 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 SYCNQ0VAF6 134 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 PRR4Q16378 134 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 TMUB2Q71RG4 321 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 PHF5AQ7RTV0 110 aaKnown RBP5.27□□□□□ -1.57
VNN3-208ENST00000427187 ZNF664Q8N3J9 261 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 SFT2D1Q8WV19 159 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 RPL39LQ96EH5 51 aaKnown RBP5.27□□□□□ -1.57
VNN3-208ENST00000427187 CYTL1Q9NRR1 136 aa5.27□□□□□ -1.57
VNN3-208ENST00000427187 IGHV1-58A0A0C4DH39 117 aa5.26□□□□□ -1.57
VNN3-208ENST00000427187 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
VNN3-208ENST00000427187 LYZL1Q6UWQ5 148 aa5.26□□□□□ -1.57
VNN3-208ENST00000427187 TCTE3Q8IZS6 198 aa5.26□□□□□ -1.57
VNN3-208ENST00000427187 GATD1Q8NB37 220 aa5.26□□□□□ -1.57
VNN3-208ENST00000427187 FAM213BQ8TBF2 198 aa5.26□□□□□ -1.57
VNN3-208ENST00000427187 LINC00959A0A1B0GUT2 108 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 C19orf71A6NCJ1 209 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 ZNF561-AS1K7EIQ3 104 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 ARPC5O15511 151 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 SNAPINO95295 136 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 APCSP02743 223 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 GIPP09681 153 aaPredicted RBP5.25□□□□□ -1.57
VNN3-208ENST00000427187 TRGC1P0CF51 173 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 CAMPP49913 170 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 CENPWQ5EE01 88 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 LCE2AQ5TA79 106 aaPredicted RBP5.25□□□□□ -1.57
VNN3-208ENST00000427187 OR5A1Q8NGJ0 315 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
VNN3-208ENST00000427187 IGLV4-69A0A075B6H9 119 aa5.24□□□□□ -1.57
VNN3-208ENST00000427187 LOC107984640A0A0U1RRK4 108 aa5.24□□□□□ -1.57
VNN3-208ENST00000427187 RAB19A4D1S5 217 aa5.24□□□□□ -1.57
VNN3-208ENST00000427187 G3V3Q6 166 aa5.24□□□□□ -1.57
VNN3-208ENST00000427187 H2AFB1P0C5Y9 115 aa5.24□□□□□ -1.57
VNN3-208ENST00000427187 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
VNN3-208ENST00000427187 RPS20P60866 119 aaKnown RBP5.24□□□□□ -1.57
VNN3-208ENST00000427187 RPL18AQ02543 176 aaKnown RBP5.24□□□□□ -1.57
VNN3-208ENST00000427187 TWIST1Q15672 202 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms